RNA id: TCONS_00046284


Basic Information

Item Value
RNA id TCONS_00046284
length 1674
RNA type mRNA
GC content 0.44
exon number 9
gene id XLOC_023405
representative True

Chromosome Information

Item Value
chromosome id NC_007135.7
NCBI id CM002908.2
chromosome length 42172926
location 20332979 ~ 20369760 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

tactattctaTTTGAATTATATTACTTGAATTAATCTACACACAAATGTTTACACTATGTTTTGTGGACTTTTTAAAATACAGCCTCTGTCCTAAATCGCTTGGATGGATGAGGAGCCTTTAAGAGGCGCGCCGTTACTATAGTGACTTCCTAAACAAACATGGCGGTGACTGTAATAAAGAGAACTTCTCCATTGTGTCATTTAATATAAGTGTATTTTTAGACATAAATATCTATGAGGCGTTTGCATCAACCATCACAGTAGACGTGTTTTACTACGCGAATGTTTAACGTTATATTTTTTTACCTAGACTAATATTTTAACGTCAAAACAATGGCTGATGAAACTGAACCAAAAGCACTAACGTTAAAGAGTTCAGAACCGTCAATAAACCGGCACACACCAGCTTCAAAGACAACTCAGGACATTTCTCATCTGCTGGCCAGCATATTCAATGATCTCTACAGCACAGAGGTGATTGGGAAGGACACCGTTTCCAATCTCAGTAAATCACGAAGAAGAGGCAACAGCTACCATGAAAAATATGTTGAGGAGCTACAACAGGTGCACAGTGAATACAACAGACGTATTCAGAATGCTGATATGCTAGAGACACACATCATACAGGCCCGTCTTCAGGCTGCTGCAAAAGAAGAGCATGATCGCAACAAAATCCTGGAAGAAGTCGGTGAGGCTTACCAACAGCTGGGACTTCCCCCAGTAAAATCAGCTTTCAAGTGGTGTGTGGACAGTGGACTTTTGAGGAGCAACAGCTTGATTTGCCCACTGGACTACACAACAGTGCACAACCCAGTTGTTAAAAGCCCAAAAGCCAGGTCAAGTCCAGGCTTTGCCAAGCCTACTTTCTCTTATAATATGCACATCTCCACTGAACTGCAGGATGATGGTTACACTCCGCTTCCTCCACACGCTCATTCAGCACACAGCCTGCTTGAATATTCAGAGGAGACAATCACACTCTCTTCCTCTCCAGAGTCCAGCTCCATCAATGACACAGAGCTAGGTTTGGTGGCGAAGGCTTCTTGGATGGAGAAGACCAGTGCTAAGAGTCATGCAGAAGACAGGGCTTCCCTGAAAAAGCACAAAGACCGGCATAAGTTTCTGCACAACCCTCGCTTCTTGCTGCCAAACACTCAGCATGGAGGAAAGTCTCTCATCATCCCAGGGAAAAAGAAGCTGGAGAATGTGGGAAAGAGCAGGAAAAACAACGGCAGAGAGAGAAGTCTTGAGGGTCATGCGCCTATTTTCACTGCAAATCCACCAGTGATCTTCTTCAGTGACTACAGAGTAGGACAAGTCTATGAGACCTCAGTGGAGCTCAAAAACATGACTGCGAGCAGCCGTCACATTCGAATGATTCCTCCAACCTCCCCACACTTCTCTGTGGGTTTGGGCCGGTTCCCTGGTGAAGGAGGCATCGTGGCTCCAGGAATGAGCTGTCAGTATATGGTGCGTTTTGCTCCAGATTCTCTAGCAGACTATGAAGACGCTCTGGTTGTGGAGACGCAGATGCTCTATCCTCTCATTATACCAATAGAAGCCTGCAGATCTCCTCCGATACTCACCTGTGAGTTAAAAGAAGCAGCATCTAGATCTTAAAGGGATAAATAactcaaaaaatgaaaacaacatgGGCACATTTACAGAACATG

Function

GO:

id name namespace
GO:0008285 negative regulation of cell population proliferation biological_process

KEGG: NA

ZFIN:

id description
ZDB-GENE-091204-65 Predicted to act upstream of or within negative regulation of cell population proliferation. Human ortholog(s) of this gene implicated in acute myeloid leukemia. Orthologous to human DLEC1 (DLEC1 cilia and flagella associated protein).

Ensembl:

ensembl_id ENSDART00000185585

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00047174 lncRNA downstream 174105 20181997 ~ 20185025 (-) True XLOC_023400
TCONS_00046274 lncRNA downstream 296080 20060691 ~ 20063050 (-) True XLOC_023398
TCONS_00046275 lncRNA downstream 297074 20060691 ~ 20062056 (-) False XLOC_023398
TCONS_00046271 lncRNA downstream 347098 20010582 ~ 20012032 (-) True XLOC_023396
TCONS_00046854 lncRNA downstream 396248 19960872 ~ 19962882 (-) True XLOC_023395
TCONS_00047175 lncRNA upstream 80267 20450027 ~ 20501301 (-) False XLOC_023407
TCONS_00046288 lncRNA upstream 80855 20450615 ~ 20470991 (-) False XLOC_023407
TCONS_00046290 lncRNA upstream 81078 20450838 ~ 20469290 (-) False XLOC_023407
TCONS_00046291 lncRNA upstream 101018 20470778 ~ 20501301 (-) False XLOC_023407
TCONS_00046315 lncRNA upstream 767415 21137175 ~ 21139396 (-) False XLOC_023418
TCONS_00046280 mRNA downstream 38118 20214418 ~ 20321012 (-) False XLOC_023404
TCONS_00046281 mRNA downstream 38650 20229240 ~ 20320480 (-) True XLOC_023404
TCONS_00046279 mRNA downstream 150656 20194022 ~ 20208474 (-) True XLOC_023403
TCONS_00046278 mRNA downstream 166134 20188914 ~ 20192996 (-) True XLOC_023402
TCONS_00046276 mRNA downstream 206165 20064088 ~ 20152965 (-) True XLOC_023399
TCONS_00046285 mRNA upstream 49199 20418959 ~ 20444844 (-) True XLOC_023406
TCONS_00046287 mRNA upstream 80267 20450027 ~ 20531813 (-) False XLOC_023407
TCONS_00046289 mRNA upstream 81044 20450804 ~ 20531474 (-) False XLOC_023407
TCONS_00046293 mRNA upstream 219698 20589458 ~ 20599781 (-) False XLOC_023408
TCONS_00046294 mRNA upstream 219918 20589678 ~ 20599880 (-) False XLOC_023408
TCONS_00046277 other downstream 171700 20187316 ~ 20187430 (-) True XLOC_023401
TCONS_00046272 other downstream 304873 20032331 ~ 20054257 (-) False XLOC_023397
TCONS_00046273 other downstream 319980 20032340 ~ 20039150 (-) True XLOC_023397
TCONS_00046264 other downstream 1070362 19288654 ~ 19288768 (-) True XLOC_023393
TCONS_00046263 other downstream 1439573 18910017 ~ 18919557 (-) True XLOC_023392
TCONS_00046286 other upstream 80267 20450027 ~ 20531586 (-) False XLOC_023407
TCONS_00046292 other upstream 101194 20470954 ~ 20471090 (-) True XLOC_023407
TCONS_00046297 other upstream 277715 20647475 ~ 20658668 (-) False XLOC_023409
TCONS_00046316 other upstream 769562 21139322 ~ 21144300 (-) True XLOC_023418
TCONS_00046357 other upstream 1593292 21963052 ~ 21963168 (-) True XLOC_023437

Expression Profile

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