Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00046367 |
| length | 895 |
| lncRNA type | sense_over |
| GC content | 0.42 |
| exon number | 2 |
| gene id | XLOC_023443 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007135.7 |
| NCBI id | CM002908.2 |
| chromosome length | 42172926 |
| location | 22070290 ~ 22103585 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0034198 | cellular response to amino acid starvation | biological_process |
| GO:0097190 | apoptotic signaling pathway | biological_process |
| GO:0010507 | negative regulation of autophagy | biological_process |
| GO:0070513 | death domain binding | molecular_function |
| id | description |
|---|---|
| ko01002 | Peptidases and inhibitors |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00047177 | lncRNA | downstream | 4390 | 22053809 ~ 22066831 (-) | True | XLOC_023442 |
| TCONS_00046337 | lncRNA | downstream | 450965 | 21611602 ~ 21620256 (-) | True | XLOC_023424 |
| TCONS_00046855 | lncRNA | downstream | 701467 | 21331016 ~ 21369754 (-) | False | XLOC_023421 |
| TCONS_00046322 | lncRNA | downstream | 701641 | 21368211 ~ 21369580 (-) | True | XLOC_023421 |
| TCONS_00046320 | lncRNA | downstream | 840050 | 21228869 ~ 21231171 (-) | True | XLOC_023420 |
| TCONS_00046370 | lncRNA | upstream | 46407 | 22123886 ~ 22149868 (-) | False | XLOC_023444 |
| TCONS_00046373 | lncRNA | upstream | 613504 | 22690983 ~ 22701598 (-) | False | XLOC_023444 |
| TCONS_00047178 | lncRNA | upstream | 613504 | 22690983 ~ 22731551 (-) | False | XLOC_023444 |
| TCONS_00047179 | lncRNA | upstream | 650985 | 22728464 ~ 22732001 (-) | True | XLOC_023444 |
| TCONS_00046376 | lncRNA | upstream | 673479 | 22750958 ~ 22756509 (-) | True | XLOC_023447 |
| TCONS_00046363 | mRNA | downstream | 55470 | 22014810 ~ 22015751 (-) | True | XLOC_023441 |
| TCONS_00046362 | mRNA | downstream | 68190 | 22002090 ~ 22003031 (-) | True | XLOC_023440 |
| TCONS_00046361 | mRNA | downstream | 79451 | 21990964 ~ 21991770 (-) | True | XLOC_023439 |
| TCONS_00046360 | mRNA | downstream | 81815 | 21978230 ~ 21989406 (-) | True | XLOC_023438 |
| TCONS_00046359 | mRNA | downstream | 98058 | 21964050 ~ 21973163 (-) | True | XLOC_023436 |
| TCONS_00046368 | mRNA | upstream | 41325 | 22118804 ~ 22702017 (-) | False | XLOC_023444 |
| TCONS_00046369 | mRNA | upstream | 44758 | 22122237 ~ 22533959 (-) | False | XLOC_023444 |
| TCONS_00046374 | mRNA | upstream | 663064 | 22740543 ~ 22756508 (-) | False | XLOC_023447 |
| TCONS_00046375 | mRNA | upstream | 664054 | 22741533 ~ 22756566 (-) | False | XLOC_023447 |
| TCONS_00046384 | mRNA | upstream | 1163965 | 23241444 ~ 23323526 (-) | False | XLOC_023449 |
| TCONS_00046358 | other | downstream | 103105 | 21964050 ~ 21968116 (-) | False | XLOC_023436 |
| TCONS_00046357 | other | downstream | 108053 | 21963052 ~ 21963168 (-) | True | XLOC_023437 |
| TCONS_00046316 | other | downstream | 926921 | 21139322 ~ 21144300 (-) | True | XLOC_023418 |
| TCONS_00046297 | other | downstream | 1412553 | 20647475 ~ 20658668 (-) | False | XLOC_023409 |
| TCONS_00046292 | other | downstream | 1600131 | 20470954 ~ 20471090 (-) | True | XLOC_023407 |
| TCONS_00046371 | other | upstream | 231465 | 22308944 ~ 22309058 (-) | True | XLOC_023445 |
| TCONS_00046372 | other | upstream | 294507 | 22371986 ~ 22372100 (-) | True | XLOC_023446 |
| TCONS_00046386 | other | upstream | 1195763 | 23273242 ~ 23273359 (-) | True | XLOC_023450 |
| TCONS_00046400 | other | upstream | 1893577 | 23971056 ~ 23977285 (-) | False | XLOC_023458 |
| TCONS_00046409 | other | upstream | 2025242 | 24102721 ~ 24118395 (-) | False | XLOC_023462 |
