Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_021578114.2 |
| length | 812 |
| RNA type | mRNA |
| GC content | 0.44 |
| exon number | 5 |
| gene id | LOC110500633 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 50081554 ~ 50083324 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0006334 | nucleosome assembly | biological_process |
| GO:0007275 | multicellular organism development | biological_process |
| GO:0000786 | nucleosome | cellular_component |
| GO:0001740 | Barr body | cellular_component |
| GO:0003677 | DNA binding | molecular_function |
| GO:0046982 | protein heterodimerization activity | molecular_function |
| id | description |
|---|---|
| K11251 | H2A; histone H2A |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2001776 | lncRNA | upstream | 127116 | 49927491 ~ 49954438 (+) | True | G1748286 |
| TU2001714 | lncRNA | upstream | 199920 | 49881346 ~ 49881634 (+) | True | G1748237 |
| TU2001713 | lncRNA | upstream | 200427 | 49880903 ~ 49881127 (+) | True | G1748236 |
| TU2001710 | lncRNA | upstream | 201467 | 49879804 ~ 49880087 (+) | True | G1748233 |
| TU2001709 | lncRNA | upstream | 201875 | 49879319 ~ 49879679 (+) | True | G1748232 |
| TU2001955 | lncRNA | downstream | 98405 | 50181729 ~ 50181990 (+) | True | G1748450 |
| TU2001967 | lncRNA | downstream | 116022 | 50199346 ~ 50199546 (+) | True | G1748462 |
| TU2001986 | lncRNA | downstream | 145987 | 50229311 ~ 50229775 (+) | True | G1748480 |
| TU2001992 | lncRNA | downstream | 161256 | 50244580 ~ 50247205 (+) | True | G1748484 |
| TU2001995 | lncRNA | downstream | 164132 | 50247456 ~ 50252566 (+) | True | G1748486 |
| XM_036958096.1 | mRNA | upstream | 25155 | 50053888 ~ 50056399 (+) | True | LOC110500632 |
| XM_021578112.2 | mRNA | upstream | 37712 | 50035554 ~ 50043842 (+) | False | LOC110500631 |
| XM_021578111.2 | mRNA | upstream | 37712 | 50035560 ~ 50043842 (+) | True | LOC110500631 |
| XM_036958093.1 | mRNA | upstream | 54157 | 49890587 ~ 50027397 (+) | False | LOC110500629 |
| XM_021578116.2 | mRNA | downstream | 133827 | 50217151 ~ 50224340 (+) | True | LOC110500635 |
| XM_021578117.2 | mRNA | downstream | 146882 | 50230206 ~ 50239928 (+) | True | LOC110500637 |
| XM_021578121.2 | mRNA | downstream | 174349 | 50257673 ~ 50263754 (+) | True | LOC110500640 |
| XM_021578119.2 | mRNA | downstream | 180587 | 50263911 ~ 50270551 (+) | False | spata6l |
| XM_036958103.1 | mRNA | downstream | 180587 | 50263911 ~ 50270551 (+) | True | spata6l |
| TU2001255 | other | upstream | 471974 | 49606153 ~ 49609580 (+) | False | LOC110500625 |
| TU2001256 | other | upstream | 471974 | 49606153 ~ 49609580 (+) | True | LOC110500625 |
| TU2001181 | other | upstream | 634928 | 49445839 ~ 49446626 (+) | True | G1747814 |
| TU2000589 | other | upstream | 1103796 | 48977326 ~ 48977758 (+) | True | G1747255 |
| TU1999753 | other | upstream | 1717628 | 48325100 ~ 48363926 (+) | True | G1746471 |
| TU2002232 | other | downstream | 515586 | 50598910 ~ 50603277 (+) | False | LOC110500883 |
| TU2002231 | other | downstream | 516203 | 50599527 ~ 50603277 (+) | True | LOC110500883 |
| TU2003188 | other | downstream | 1033121 | 51116445 ~ 51133338 (+) | True | LOC110500674 |
| TU2003175 | other | downstream | 1050765 | 51134089 ~ 51142008 (+) | True | gbrap |
| TU2003336 | other | downstream | 1279362 | 51362686 ~ 51363380 (+) | True | G1749651 |
