Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU2003338 |
| length | 580 |
| lncRNA type | sense_over |
| GC content | 0.37 |
| exon number | 1 |
| gene id | LOC110500687 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 51350884 ~ 51361534 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2003343 | lncRNA | upstream | 8753 | 51350884 ~ 51351562 (+) | False | LOC110500687 |
| TU2003329 | lncRNA | upstream | 17302 | 51342486 ~ 51343013 (+) | True | G1749646 |
| TU2003327 | lncRNA | upstream | 18722 | 51341367 ~ 51341593 (+) | True | G1749644 |
| TU2003325 | lncRNA | upstream | 20408 | 51339518 ~ 51339907 (+) | True | G1749642 |
| TU2003324 | lncRNA | upstream | 21615 | 51338343 ~ 51338700 (+) | True | G1749641 |
| TU2003344 | lncRNA | downstream | 4515 | 51365409 ~ 51365714 (+) | True | G1749659 |
| TU2003359 | lncRNA | downstream | 23451 | 51384345 ~ 51385146 (+) | True | G1749674 |
| TU2003362 | lncRNA | downstream | 28801 | 51389695 ~ 51403541 (+) | True | G1749677 |
| TU2003333 | lncRNA | downstream | 52477 | 51413371 ~ 51414218 (+) | True | G1749649 |
| TU2003339 | lncRNA | downstream | 53886 | 51414780 ~ 51416353 (+) | True | G1749654 |
| XM_021578185.2 | mRNA | upstream | 28123 | 51316814 ~ 51332192 (+) | True | LOC110500686 |
| XR_002470145.2 | mRNA | upstream | 59119 | 51298879 ~ 51301196 (+) | False | LOC110500685 |
| XM_036958129.1 | mRNA | upstream | 129495 | 51217984 ~ 51230820 (+) | False | LOC110500679 |
| XM_036958130.1 | mRNA | upstream | 129495 | 51218295 ~ 51230820 (+) | True | LOC110500679 |
| XM_021578180.2 | mRNA | upstream | 143386 | 51202043 ~ 51216929 (+) | True | LOC110500680 |
| XM_036958136.1 | mRNA | downstream | 9827 | 51370721 ~ 51413247 (+) | True | LOC110500885 |
| XM_021578194.2 | mRNA | downstream | 96334 | 51457228 ~ 51485888 (+) | False | LOC110500691 |
| XM_021578195.2 | mRNA | downstream | 96334 | 51457228 ~ 51485888 (+) | True | LOC110500691 |
| XM_021578199.2 | mRNA | downstream | 140704 | 51501598 ~ 51507145 (+) | False | LOC110500694 |
| XM_036958139.1 | mRNA | downstream | 140704 | 51501598 ~ 51507145 (+) | True | LOC110500694 |
| TU2003175 | other | upstream | 218307 | 51134089 ~ 51142008 (+) | True | gbrap |
| TU2003188 | other | upstream | 226977 | 51116445 ~ 51133338 (+) | True | LOC110500674 |
| TU2002232 | other | upstream | 757038 | 50598910 ~ 50603277 (+) | False | LOC110500883 |
| TU2002231 | other | upstream | 757038 | 50599527 ~ 50603277 (+) | True | LOC110500883 |
| TU2001256 | other | upstream | 1750735 | 49606153 ~ 49609580 (+) | True | LOC110500625 |
| TU2003336 | other | downstream | 1792 | 51362686 ~ 51363380 (+) | True | G1749651 |
| TU2003334 | other | downstream | 58075 | 51418969 ~ 51450475 (+) | False | G1749650 |
| TU2003752 | other | downstream | 710706 | 52071600 ~ 52079002 (+) | True | G1750012 |
| TU2003773 | other | downstream | 733815 | 52094709 ~ 52095105 (+) | True | G1750030 |
| TU2003797 | other | downstream | 830306 | 52191200 ~ 52197007 (+) | True | G1750050 |
