Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU2001407 |
| length | 274 |
| lncRNA type | inter_gene |
| GC content | 0.50 |
| exon number | 1 |
| gene id | G1747975 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 49675235 ~ 49675508 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2001398 | lncRNA | upstream | 6279 | 49668747 ~ 49668956 (+) | True | G1747966 |
| TU2001304 | lncRNA | upstream | 10112 | 49664804 ~ 49665123 (+) | True | G1747905 |
| TU2001208 | lncRNA | upstream | 90063 | 49543651 ~ 49585172 (+) | True | G1747830 |
| TU2001213 | lncRNA | upstream | 93847 | 49563533 ~ 49581388 (+) | True | G1747832 |
| TU2001207 | lncRNA | upstream | 174992 | 49475252 ~ 49500243 (+) | False | G1747830 |
| TU2001409 | lncRNA | downstream | 543 | 49676051 ~ 49676367 (+) | True | G1747977 |
| TU2001458 | lncRNA | downstream | 83582 | 49759090 ~ 49759342 (+) | True | G1748021 |
| TU2001464 | lncRNA | downstream | 92503 | 49768011 ~ 49768407 (+) | True | G1748026 |
| TU2001404 | lncRNA | downstream | 97985 | 49773493 ~ 49776111 (+) | True | G1747972 |
| TU2001584 | lncRNA | downstream | 109058 | 49784566 ~ 49785100 (+) | True | G1748110 |
| XM_021578101.2 | mRNA | upstream | 12577 | 49654692 ~ 49662658 (+) | True | LOC110500627 |
| XM_021578092.2 | mRNA | upstream | 51803 | 49611251 ~ 49623432 (+) | False | aco1 |
| XM_021578093.2 | mRNA | upstream | 51803 | 49612440 ~ 49623432 (+) | True | aco1 |
| XM_021578096.2 | mRNA | upstream | 65521 | 49606125 ~ 49609714 (+) | False | LOC110500625 |
| XM_036958088.1 | mRNA | downstream | 5160 | 49680668 ~ 49772757 (+) | False | LOC110500628 |
| XM_036958086.1 | mRNA | downstream | 5167 | 49680675 ~ 49772757 (+) | False | LOC110500628 |
| XM_036958089.1 | mRNA | downstream | 5169 | 49680677 ~ 49772757 (+) | False | LOC110500628 |
| XM_036958087.1 | mRNA | downstream | 5172 | 49680680 ~ 49772757 (+) | False | LOC110500628 |
| XM_036958090.1 | mRNA | downstream | 5172 | 49680680 ~ 49772757 (+) | False | LOC110500628 |
| TU2001255 | other | upstream | 65655 | 49606153 ~ 49609580 (+) | False | LOC110500625 |
| TU2001256 | other | upstream | 65655 | 49606153 ~ 49609580 (+) | True | LOC110500625 |
| TU2001181 | other | upstream | 228609 | 49445839 ~ 49446626 (+) | True | G1747814 |
| TU2000589 | other | upstream | 697477 | 48977326 ~ 48977758 (+) | True | G1747255 |
| TU1999753 | other | upstream | 1311309 | 48325100 ~ 48363926 (+) | True | G1746471 |
| TU2002232 | other | downstream | 923402 | 50598910 ~ 50603277 (+) | False | LOC110500883 |
| TU2002231 | other | downstream | 924019 | 50599527 ~ 50603277 (+) | True | LOC110500883 |
| TU2003188 | other | downstream | 1440937 | 51116445 ~ 51133338 (+) | True | LOC110500674 |
| TU2003175 | other | downstream | 1458581 | 51134089 ~ 51142008 (+) | True | gbrap |
| TU2003336 | other | downstream | 1687178 | 51362686 ~ 51363380 (+) | True | G1749651 |
