Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU2002244 |
| length | 323 |
| lncRNA type | inter_gene |
| GC content | 0.41 |
| exon number | 1 |
| gene id | G1748685 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 50587142 ~ 50587464 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2002238 | lncRNA | upstream | 17082 | 50569264 ~ 50570060 (+) | True | G1748679 |
| TU2002205 | lncRNA | upstream | 50216 | 50534009 ~ 50536926 (+) | True | G1748657 |
| TU2002082 | lncRNA | upstream | 171782 | 50375607 ~ 50415360 (+) | True | G1748560 |
| TU2002100 | lncRNA | upstream | 179413 | 50402621 ~ 50407729 (+) | True | G1748578 |
| TU2002036 | lncRNA | upstream | 229050 | 50357375 ~ 50358092 (+) | True | G1748517 |
| TU2002125 | lncRNA | downstream | 4628 | 50592092 ~ 50596540 (+) | True | LOC110500658 |
| TU2002262 | lncRNA | downstream | 29963 | 50617427 ~ 50617656 (+) | True | G1748703 |
| TU2002263 | lncRNA | downstream | 30822 | 50618286 ~ 50618774 (+) | True | G1748704 |
| TU2002265 | lncRNA | downstream | 33322 | 50620786 ~ 50621017 (+) | True | G1748706 |
| TU2002287 | lncRNA | downstream | 123466 | 50710930 ~ 50711195 (+) | True | G1748728 |
| XM_021578142.2 | mRNA | upstream | 8275 | 50562901 ~ 50578867 (+) | False | LOC110500656 |
| XM_021578141.2 | mRNA | upstream | 8275 | 50562902 ~ 50578867 (+) | True | LOC110500656 |
| XM_036958116.1 | mRNA | upstream | 56951 | 50519031 ~ 50530191 (+) | True | LOC110500882 |
| XM_036958117.1 | mRNA | upstream | 57176 | 50519018 ~ 50529966 (+) | False | LOC110500882 |
| XM_021578135.2 | mRNA | upstream | 79041 | 50505238 ~ 50508101 (+) | True | LOC110500651 |
| XM_021578143.2 | mRNA | downstream | 4582 | 50592046 ~ 50598188 (+) | False | LOC110500658 |
| trnaa-cgc-5 | mRNA | downstream | 11079 | 50598543 ~ 50598614 (+) | True | trnaa-cgc-5 |
| XM_036958121.1 | mRNA | downstream | 11335 | 50598799 ~ 50615280 (+) | False | LOC110500883 |
| XM_036958124.1 | mRNA | downstream | 11335 | 50598799 ~ 50615280 (+) | False | LOC110500883 |
| XM_036958122.1 | mRNA | downstream | 11336 | 50598800 ~ 50615280 (+) | False | LOC110500883 |
| TU2001255 | other | upstream | 977562 | 49606153 ~ 49609580 (+) | False | LOC110500625 |
| TU2001256 | other | upstream | 977562 | 49606153 ~ 49609580 (+) | True | LOC110500625 |
| TU2001181 | other | upstream | 1140516 | 49445839 ~ 49446626 (+) | True | G1747814 |
| TU2000589 | other | upstream | 1609384 | 48977326 ~ 48977758 (+) | True | G1747255 |
| TU1999753 | other | upstream | 2223216 | 48325100 ~ 48363926 (+) | True | G1746471 |
| TU2002232 | other | downstream | 11446 | 50598910 ~ 50603277 (+) | False | LOC110500883 |
| TU2002231 | other | downstream | 12063 | 50599527 ~ 50603277 (+) | True | LOC110500883 |
| TU2003188 | other | downstream | 528981 | 51116445 ~ 51133338 (+) | True | LOC110500674 |
| TU2003175 | other | downstream | 546625 | 51134089 ~ 51142008 (+) | True | gbrap |
| TU2003336 | other | downstream | 775222 | 51362686 ~ 51363380 (+) | True | G1749651 |
