Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU2003157 |
| length | 262 |
| lncRNA type | inter_gene |
| GC content | 0.38 |
| exon number | 1 |
| gene id | G1749498 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 51085569 ~ 51085830 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2003145 | lncRNA | upstream | 30112 | 51055242 ~ 51055457 (+) | True | G1749486 |
| TU2003129 | lncRNA | upstream | 49537 | 51035570 ~ 51036032 (+) | True | G1749470 |
| TU2003091 | lncRNA | upstream | 92431 | 50990742 ~ 50993138 (+) | True | G1749436 |
| TU2003086 | lncRNA | upstream | 98850 | 50982248 ~ 50986719 (+) | True | G1749434 |
| TU2002904 | lncRNA | upstream | 173436 | 50825812 ~ 50912133 (+) | True | G1749270 |
| TU2003187 | lncRNA | downstream | 57155 | 51142985 ~ 51143430 (+) | True | G1749521 |
| TU2003202 | lncRNA | downstream | 57888 | 51143718 ~ 51144006 (+) | True | G1749536 |
| TU2003206 | lncRNA | downstream | 80519 | 51166349 ~ 51166714 (+) | True | G1749540 |
| TU2003235 | lncRNA | downstream | 114830 | 51200660 ~ 51200930 (+) | True | G1749567 |
| TU2003248 | lncRNA | downstream | 153441 | 51239271 ~ 51239603 (+) | True | G1749580 |
| XM_021578158.2 | mRNA | upstream | 17657 | 51053386 ~ 51067912 (+) | False | LOC110500669 |
| XM_036958127.1 | mRNA | upstream | 17657 | 51056162 ~ 51067912 (+) | False | LOC110500669 |
| XM_021578159.2 | mRNA | upstream | 17657 | 51056600 ~ 51067912 (+) | True | LOC110500669 |
| XM_021578155.2 | mRNA | upstream | 175962 | 50906480 ~ 50909607 (+) | True | LOC110500665 |
| XM_021578153.2 | mRNA | upstream | 180271 | 50902786 ~ 50905298 (+) | True | LOC110500664 |
| XM_021578163.2 | mRNA | downstream | 14170 | 51100000 ~ 51101654 (+) | True | LOC110500672 |
| XM_021578164.2 | mRNA | downstream | 21900 | 51107730 ~ 51110207 (+) | True | elp5 |
| XM_021578165.2 | mRNA | downstream | 30532 | 51116362 ~ 51133346 (+) | False | LOC110500674 |
| XM_021578166.2 | mRNA | downstream | 30533 | 51116363 ~ 51133346 (+) | False | LOC110500674 |
| NM_001165091.1 | mRNA | downstream | 48668 | 51134498 ~ 51141897 (+) | False | gbrap |
| TU2002232 | other | upstream | 482292 | 50598910 ~ 50603277 (+) | False | LOC110500883 |
| TU2002231 | other | upstream | 482292 | 50599527 ~ 50603277 (+) | True | LOC110500883 |
| TU2001255 | other | upstream | 1475989 | 49606153 ~ 49609580 (+) | False | LOC110500625 |
| TU2001256 | other | upstream | 1475989 | 49606153 ~ 49609580 (+) | True | LOC110500625 |
| TU2001181 | other | upstream | 1638943 | 49445839 ~ 49446626 (+) | True | G1747814 |
| TU2003188 | other | downstream | 30615 | 51116445 ~ 51133338 (+) | True | LOC110500674 |
| TU2003175 | other | downstream | 48259 | 51134089 ~ 51142008 (+) | True | gbrap |
| TU2003336 | other | downstream | 276856 | 51362686 ~ 51363380 (+) | True | G1749651 |
| TU2003334 | other | downstream | 333139 | 51418969 ~ 51450475 (+) | False | G1749650 |
| TU2003752 | other | downstream | 985770 | 52071600 ~ 52079002 (+) | True | G1750012 |
