RNA id: TU2384668



Basic Information


Item Value
RNA id TU2384668
length 775
RNA type TUCP
GC content 0.43
exon number 2
gene id G2085314
representative True

Chromosome Information


Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 44118223 ~ 44119239 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


gtctctatatgtctctctgtctgtctctctctatgtctctagatgtctgtctgtcagtctctctctatatctctgtctgtctctatctctatcggtctgtctctctgtctgtctgtctccatctgtctgtctctctctatgtctctatatgtctgtctgtctctctctgtctctatatgtctgtctgtcagtctctctctatgtctctatctgtctgtctctctctatgtctctatatgtctgtctgtctctatgtctctgtctatatctgtctgtctgtctctctctatgtctctatatgtctgtctgtcagtctctctctatgtctctatatgtctgtctgtcagtctctctctatgtctctatatgtctgtctctctctatgtctctgtctctatctgtctgtctgtctctctctatgtctgtctgtctctctccatgtctctgtctatgtctctatatgtctgtctgtcattctctctctatgtctctgtctgtctctctctgtctctatatgtctgtctgtctgtctctctctatgtctctctctatgtctctatatgtctgtctgtctgtttctctctatgtctctgtctctatatgtctgtctgtctctctgtgtctctgtctgtctctatctctatctgtctgtctctctctctctctgtctctctctctatctgtctgtctgtctctgtctgtctctgtctctatctgtctctctgtctgtctctatctgtctgtctgtctctctatttctctgtctgtctctatc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2384619 lncRNA upstream 55078 44061807 ~ 44063145 (+) True G2085283
TU2384618 lncRNA upstream 60203 44056743 ~ 44058020 (+) True G2085282
TU2384616 lncRNA upstream 66327 44051095 ~ 44051896 (+) True G2085280
TU2384614 lncRNA upstream 75882 44041226 ~ 44042341 (+) True G2085278
TU2384609 lncRNA upstream 76272 44038808 ~ 44041951 (+) False G2085275
TU2384679 lncRNA downstream 23298 44142537 ~ 44142949 (+) True G2085324
TU2384692 lncRNA downstream 52044 44171283 ~ 44172182 (+) True G2085337
TU2384661 lncRNA downstream 63404 44182643 ~ 44182909 (+) True G2085308
TU2384710 lncRNA downstream 79813 44199052 ~ 44205726 (+) False G2085352
TU2384713 lncRNA downstream 80302 44199541 ~ 44202380 (+) True G2085352
LOC110507242 mRNA upstream 16332 44100049 ~ 44101891 (+) True LOC110507242
XM_036965492.1 mRNA upstream 20187 44095444 ~ 44098036 (+) True cldn8
XM_021588541.2 mRNA upstream 28008 44088591 ~ 44090215 (+) True zgc:110333
XM_036965730.1 mRNA upstream 48638 43873126 ~ 44069585 (+) False LOC110508084
XM_036965732.1 mRNA upstream 48638 43873126 ~ 44069585 (+) False LOC110508084
XM_036965371.1 mRNA downstream 748748 44867987 ~ 45360655 (+) False cadm2b
XM_036965373.1 mRNA downstream 748748 44867987 ~ 45360655 (+) False cadm2b
XM_036965372.1 mRNA downstream 748750 44867989 ~ 45360655 (+) False cadm2b
XM_036965702.1 mRNA downstream 1324666 45443905 ~ 45479066 (+) False usp16
XM_036965698.1 mRNA downstream 1324667 45443906 ~ 45479066 (+) False usp16
TU2384422 other upstream 384329 43732395 ~ 43733894 (+) True G2085122
TU2384320 other upstream 585645 43532270 ~ 43532578 (+) True G2085037
TU2383825 other upstream 1053966 43063288 ~ 43064257 (+) True G2084659
TU2383238 other upstream 1856586 42260523 ~ 42261637 (+) True G2084156
TU2382880 other upstream 2006187 41971259 ~ 42112036 (+) False G2083851
TU2385505 other downstream 288814 44408053 ~ 44410050 (+) True G2085969
TU2386442 other downstream 1367398 45486637 ~ 45487737 (+) True LOC110508103
TU2386453 other downstream 1410217 45529456 ~ 45529939 (+) True mtus2b
TU2387070 other downstream 1677860 45797099 ~ 45798593 (+) True G2087149
TU2387599 other downstream 2203845 46323084 ~ 46323694 (+) True G2087569

Expression Profile