RNA id: TU2391955


Basic Information

Item Value
RNA id TU2391955
length 1285
lncRNA type inter_gene
GC content 0.38
exon number 2
gene id G2091034
representative True

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 50241928 ~ 50243314 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

ATCCTGTACTACTTCATCAGGTGAATATCCTGTACTACTTCATCAGGTGAATATCCTGTACTACTTCATCAGGTAAATATCCTGTACTACTTCATCAGGTGAATATCCTGTACTACTTCATCAGGTAAATATCCTGTACTACTTCATCAGGTGAATATCCTGTACTACTTCATCAGGTGAATATTCTGTACTACTTCATCAGGTGAATATCCTGACTACTTCATCAGGTGAATATCCTGTACTACTTCATCAGGTGAATATCCTGTACTACTTCATCAGGTGAATATCCTGTCGACTTCATCAGGTGAATATCCTGTACTACTTTATCAGGTGAATATCCTGTACTACTTCATCAGGTGAATTTCCTGTACTACTTCATCAGGTGAATATTCTGTACTACTTTATCAGGTGAATATCCTGTACTACTTCATCAGGTGAATTTCCTGTACTACTTCATCAGGTGAATATCCTGTATTACTTCATCAGGTGAATATCCTGTACTACTTCATCAGGTGAATTTCCTGTACTACTTCATCAGGTGAATATCCTGTACTACTTCATCAGGTGAATATCCTGACTACTTCATCAGGTGAATATCCTGTACTACTTCATCAGGTGAATATCCTGTACTACTTCATCAGGTGAATATCCTGTACTACTTTATCAGGTGAATATCCTGTACTACTTTATCAGGTGAATATCCTGTACTACTTCATCAGGTGAATATCCTGTACTACTTCATCAGGTGAAAATCCTGTACTACTTCATCAGGTGAATATCCTGACTACTTCATCAGGTGAATATCCTGACTACTTCATCAGGTGAATATCCTGACTACTTCATCAGGTGAATATCCTGACTACTTCATCAGGTGAATATCCTGTACTACTTCATCAGGTGAATATCCTGTACTACTTTATCAGGTGAATATCCTGTACTACTTCATCAGGTGAAAATCCTGTACTACTTCATCAGGTGAATATCCTGCACTACTTCATCAAGTGAATATCCTGTACTACTTCATCAGGTGAATATCCTGTACTACTTCATCAGGTGAATATCTTGACTACTTCATCAGGGAGATCTGAATATATGGTACTACTTTATCAGGGAGATCTGAATGTACTGTACTACTTCATCAGGGAGATCTGAATGTACTGTACTACTTCATCAGGGAGATCTGAATGTACTGTACTACTACATCAGGGAGATCTGAATATCCTGTACTACTACATCAGGGAGGTCTGAATATACTGTACTTCTTCATCAGGTGAATATACTGTAC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU2391557 lncRNA upstream 28484 50212657 ~ 50213444 (+) True G2090694
TU2391483 lncRNA upstream 179981 50061437 ~ 50061947 (+) True G2090626
TU2391479 lncRNA upstream 190061 50051345 ~ 50051867 (+) True G2090622
TU2391474 lncRNA upstream 197619 50043279 ~ 50044309 (+) False G2090618
TU2391475 lncRNA upstream 197922 50043279 ~ 50044006 (+) True G2090618
TU2391959 lncRNA downstream 821 50244135 ~ 50244364 (+) True G2091038
TU2391969 lncRNA downstream 5440 50248754 ~ 50249169 (+) True G2091048
TU2391976 lncRNA downstream 9253 50252567 ~ 50253088 (+) True G2091055
TU2391978 lncRNA downstream 9805 50253119 ~ 50253343 (+) True G2091057
TU2392011 lncRNA downstream 48048 50291362 ~ 50291817 (+) True G2091080
XR_005040013.1 mRNA upstream 918062 49323013 ~ 49323866 (+) False LOC118944717
XM_036965366.1 mRNA upstream 975293 49201448 ~ 49266635 (+) True pgr
XM_036965696.1 mRNA upstream 1055815 49089883 ~ 49186113 (+) False trpc6b
XM_036964717.1 mRNA upstream 1467247 48633372 ~ 48774681 (+) False zmp:0000001236
XM_036965521.1 mRNA downstream 222569 50465883 ~ 50476608 (+) False LOC110508133
XM_036965522.1 mRNA downstream 222603 50465917 ~ 50476608 (+) False LOC110508133
XM_036965524.1 mRNA downstream 223751 50467065 ~ 50476608 (+) False LOC110508133
XM_036965523.1 mRNA downstream 223781 50467095 ~ 50476608 (+) True LOC110508133
XM_036964625.1 mRNA downstream 422405 50665719 ~ 50850459 (+) True LOC110507254
TU2391495 other upstream 154237 50082063 ~ 50087691 (+) True G2090638
TU2391337 other upstream 453123 49785127 ~ 49788805 (+) True G2090508
TU2390858 other upstream 907745 49333447 ~ 49334183 (+) True G2090103
TU2390856 other upstream 918325 49323169 ~ 49323603 (+) True LOC118944717
TU2390846 other upstream 925702 49312743 ~ 49316226 (+) True G2090091
TU2392024 other downstream 109054 50352368 ~ 50353167 (+) True G2091093
TU2392994 other downstream 1126450 51369764 ~ 51370763 (+) False G2091895
TU2392995 other downstream 1126620 51369934 ~ 51370763 (+) True G2091895
TU2393075 other downstream 1226574 51469888 ~ 51470391 (+) True G2091960

Expression Profile