RNA id: TU2392024



Basic Information


Item Value
RNA id TU2392024
length 332
RNA type TUCP
GC content 0.43
exon number 2
gene id G2091093
representative True

Chromosome Information


Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 50352368 ~ 50353167 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


AGTAACCTTCACTATGGAATGACAGTGAAAATAGGTGTCAGTAACCTTCACTATGGAATGACAGTGAACAGAGGTGTCAGTAACCTTCACTATGGAATGACAGTGAACAGAGGTGTCAGTAACCTTCACCATGGAATGACAGTGAACAGAGGTGTCAGTAACCTTCACTATGGAATGACAGTGAACAGAGGTGTCAGTAACCTTCACTATGGAATGACAGTGAACAGAGGTGTCAGTAACCTTCACTATGGAATGACAGTGAACAGAGGTGTCAGTAACCTTCACTTTGGAAATACAGTGAACAGAGGTGTCAGTAACCTTCACTATGGCGT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2392023 lncRNA upstream 1297 50350782 ~ 50351071 (+) True G2091092
TU2392011 lncRNA upstream 60551 50291362 ~ 50291817 (+) True G2091080
TU2391978 lncRNA upstream 99025 50253119 ~ 50253343 (+) True G2091057
TU2391976 lncRNA upstream 99280 50252567 ~ 50253088 (+) True G2091055
TU2391969 lncRNA upstream 103199 50248754 ~ 50249169 (+) True G2091048
TU2392029 lncRNA downstream 6160 50359327 ~ 50359537 (+) True G2091098
TU2392069 lncRNA downstream 38297 50391464 ~ 50391742 (+) True G2091131
TU2392074 lncRNA downstream 40505 50393672 ~ 50397113 (+) True G2091135
TU2392099 lncRNA downstream 72076 50425243 ~ 50427712 (+) False G2091153
TU2392100 lncRNA downstream 73607 50426774 ~ 50429069 (+) True G2091153
XR_005040013.1 mRNA upstream 1028502 49323013 ~ 49323866 (+) False LOC118944717
XM_036965366.1 mRNA upstream 1085733 49201448 ~ 49266635 (+) True pgr
XM_036965696.1 mRNA upstream 1166255 49089883 ~ 49186113 (+) False trpc6b
XM_036964717.1 mRNA upstream 1577687 48633372 ~ 48774681 (+) False zmp:0000001236
XM_036965521.1 mRNA downstream 112716 50465883 ~ 50476608 (+) False LOC110508133
XM_036965522.1 mRNA downstream 112750 50465917 ~ 50476608 (+) False LOC110508133
XM_036965524.1 mRNA downstream 113898 50467065 ~ 50476608 (+) False LOC110508133
XM_036965523.1 mRNA downstream 113928 50467095 ~ 50476608 (+) True LOC110508133
XM_036964625.1 mRNA downstream 312552 50665719 ~ 50850459 (+) True LOC110507254
TU2391495 other upstream 264677 50082063 ~ 50087691 (+) True G2090638
TU2391337 other upstream 563563 49785127 ~ 49788805 (+) True G2090508
TU2390858 other upstream 1018185 49333447 ~ 49334183 (+) True G2090103
TU2390856 other upstream 1028765 49323169 ~ 49323603 (+) True LOC118944717
TU2390846 other upstream 1036142 49312743 ~ 49316226 (+) True G2090091
TU2392994 other downstream 1016597 51369764 ~ 51370763 (+) False G2091895
TU2392995 other downstream 1016767 51369934 ~ 51370763 (+) True G2091895
TU2393075 other downstream 1116721 51469888 ~ 51470391 (+) True G2091960

Expression Profile