RNA id: TU2392488


Basic Information

Item Value
RNA id TU2392488
length 295
lncRNA type intronic
GC content 0.50
exon number 4
gene id G2091465
representative True

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 50802498 ~ 50814426 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

GatatctagagggtagtgtggtgatctctagaggGgtgtgtggtgatctctagagggtagtgtggtgatctctagagggcagtgtggtgtggtgatatctagagggtagtgtggtgatctctatggggtagtgtgatgatCTCTAgtgggtagtgtggtgatctctagggGGTAGTGTGGTGATATCTAGAGGgtggtgtggtgatctctatagggtagtgtggtgtggtgatctctagggggtagtgtggtgatatctagagggtagtgtggtgatctctatagggcagtgtgg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU2392487 lncRNA upstream 1110 50792640 ~ 50801388 (+) False G2091464
TU2392484 lncRNA upstream 1110 50794790 ~ 50801388 (+) True G2091464
TU2392492 lncRNA upstream 2711 50796982 ~ 50799787 (+) True G2091467
TU2392474 lncRNA upstream 27458 50774256 ~ 50775040 (+) True G2091459
TU2392468 lncRNA upstream 38391 50763543 ~ 50764107 (+) True G2091453
TU2392509 lncRNA downstream 27740 50842166 ~ 50844365 (+) True G2091483
TU2392405 lncRNA downstream 47579 50862005 ~ 50869242 (+) True G2091410
TU2392406 lncRNA downstream 50171 50864597 ~ 50882759 (+) True G2091411
TU2392514 lncRNA downstream 55245 50869671 ~ 50870463 (+) True G2091488
TU2392409 lncRNA downstream 57356 50871782 ~ 50874409 (+) True G2091414
XM_036965521.1 mRNA upstream 325890 50465883 ~ 50476608 (+) False LOC110508133
XM_036965522.1 mRNA upstream 325890 50465917 ~ 50476608 (+) False LOC110508133
XM_036965524.1 mRNA upstream 325890 50467065 ~ 50476608 (+) False LOC110508133
XM_036965523.1 mRNA upstream 325890 50467095 ~ 50476608 (+) True LOC110508133
XR_005040013.1 mRNA upstream 1478632 49323013 ~ 49323866 (+) False LOC118944717
XM_036965435.1 mRNA downstream 659094 51473520 ~ 51509546 (+) False LOC110508131
XM_036965436.1 mRNA downstream 659094 51473520 ~ 51509546 (+) False LOC110508131
XM_036965437.1 mRNA downstream 659094 51473520 ~ 51509546 (+) False LOC110508131
XM_036965439.1 mRNA downstream 659094 51473520 ~ 51509546 (+) False LOC110508131
XM_036965440.1 mRNA downstream 659094 51473520 ~ 51509546 (+) False LOC110508131
TU2392024 other upstream 449331 50352368 ~ 50353167 (+) True G2091093
TU2391495 other upstream 714807 50082063 ~ 50087691 (+) True G2090638
TU2391337 other upstream 1013693 49785127 ~ 49788805 (+) True G2090508
TU2390858 other upstream 1468315 49333447 ~ 49334183 (+) True G2090103
TU2390856 other upstream 1478895 49323169 ~ 49323603 (+) True LOC118944717
TU2392994 other downstream 555338 51369764 ~ 51370763 (+) False G2091895
TU2392995 other downstream 555508 51369934 ~ 51370763 (+) True G2091895
TU2393075 other downstream 655462 51469888 ~ 51470391 (+) True G2091960

Expression Profile