RNA id: TU2393013


Basic Information

Item Value
RNA id TU2393013
length 706
lncRNA type intronic
GC content 0.53
exon number 3
gene id G2091911
representative False

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 51401178 ~ 51404738 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

ggcagagagagaggcagagagggagagagagaggcagagagggagagagagagagaggcagagagagagagtgacgtagcggtagagacgtagcggtagagacgtagcggtagagacgtagcggtagagacgtagcggtagagacgtagcggtagagacgtagcggtagagacgtagcggtagagacgtagcggtagagacgtagcggtagagaggaagagaagtagaggaagagaagtagaggtagagaagtagaggtagagaggtagcattagagaggtagaggtagagacgtagcattagagacgtagcggtagagaggaagagaagtagaagtagagaggaagaggtagagacgtagaagtagagaggaagaaacgtagaggtagaggggaagagacgtagacatagagaggaagagacgtagaggtagagaggtagaggtagagacgtagaggtagagaggtagaggtagagacgtaggggtaaagaggtagagacgtagaggtagagaggtagagacgtagcattagagacgtagcggtagagacgtagcggtagagacgtagcggtagagacgtagcggtagagacgtagcggtagagacgtagcggtagagacgtagcggtagagacgtagcggtagagacgtagcggtagagacgtagcggtagagacgtagcggtagagacgtagcggtagagacg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU2393009 lncRNA upstream 16721 51384190 ~ 51384457 (+) True G2091909
TU2393008 lncRNA upstream 17512 51383266 ~ 51383666 (+) True G2091908
TU2393006 lncRNA upstream 20211 51380503 ~ 51380967 (+) True G2091906
TU2393002 lncRNA upstream 29377 51371534 ~ 51371801 (+) True G2091902
TU2392993 lncRNA upstream 31642 51364200 ~ 51369536 (+) True G2091894
TU2393016 lncRNA downstream 274 51402369 ~ 51403880 (+) False G2091912
TU2393017 lncRNA downstream 274 51402369 ~ 51405030 (+) True G2091912
TU2393023 lncRNA downstream 14381 51416476 ~ 51417218 (+) False G2091914
TU2393024 lncRNA downstream 14381 51416476 ~ 51417741 (+) True G2091914
TU2393027 lncRNA downstream 21646 51423741 ~ 51424025 (+) True G2091917
XM_036964625.1 mRNA upstream 550719 50665719 ~ 50850459 (+) True LOC110507254
XM_036965521.1 mRNA upstream 924570 50465883 ~ 50476608 (+) False LOC110508133
XM_036965435.1 mRNA downstream 71425 51473520 ~ 51509546 (+) False LOC110508131
XM_036965436.1 mRNA downstream 71425 51473520 ~ 51509546 (+) False LOC110508131
XM_036965437.1 mRNA downstream 71425 51473520 ~ 51509546 (+) False LOC110508131
XM_036965439.1 mRNA downstream 71425 51473520 ~ 51509546 (+) False LOC110508131
XM_036965440.1 mRNA downstream 71425 51473520 ~ 51509546 (+) False LOC110508131
TU2392994 other upstream 30415 51369764 ~ 51370763 (+) False G2091895
TU2392995 other upstream 30415 51369934 ~ 51370763 (+) True G2091895
TU2392024 other upstream 1048011 50352368 ~ 50353167 (+) True G2091093
TU2391495 other upstream 1313487 50082063 ~ 50087691 (+) True G2090638
TU2391337 other upstream 1612373 49785127 ~ 49788805 (+) True G2090508
TU2393075 other downstream 67793 51469888 ~ 51470391 (+) True G2091960

Expression Profile