RNA id: TU2393087


Basic Information

Item Value
RNA id TU2393087
length 217
lncRNA type inter_gene
GC content 0.54
exon number 1
gene id G2091972
representative True

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 51514197 ~ 51514413 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

tagtggtggctgtttaacagtctgatggccttgagatagaagctgtttttcagtctctcggtcccagctttgatgcacctgtactgacctcgccttctggatgatagcggggtgaacaggcagtggctcgggtggtagaaaggccaaaacctaggaagaaacctagagaggaaccaggctatgtggggtggccagtcctcttctggctgtgcggggt

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU2393062 lncRNA upstream 52553 51461434 ~ 51461644 (+) True G2091952
TU2393059 lncRNA upstream 55039 51458893 ~ 51459158 (+) True G2091949
TU2393058 lncRNA upstream 55620 51458322 ~ 51458577 (+) True G2091948
TU2393053 lncRNA upstream 60211 51453754 ~ 51453986 (+) True G2091943
TU2393052 lncRNA upstream 61010 51452951 ~ 51453187 (+) True G2091942
TU2393269 lncRNA downstream 9819 51524232 ~ 51524540 (+) True G2092135
TU2393276 lncRNA downstream 12588 51527001 ~ 51527298 (+) True G2092139
XM_036965479.1 mRNA upstream 3747 51473520 ~ 51510450 (+) True LOC110508131
XM_036965435.1 mRNA upstream 4651 51473520 ~ 51509546 (+) False LOC110508131
XM_036965436.1 mRNA upstream 4651 51473520 ~ 51509546 (+) False LOC110508131
XM_036965437.1 mRNA upstream 4651 51473520 ~ 51509546 (+) False LOC110508131
XM_036965439.1 mRNA upstream 4651 51473520 ~ 51509546 (+) False LOC110508131
TU2393075 other upstream 43806 51469888 ~ 51470391 (+) True G2091960
TU2392994 other upstream 143434 51369764 ~ 51370763 (+) False G2091895
TU2392995 other upstream 143434 51369934 ~ 51370763 (+) True G2091895
TU2392024 other upstream 1161030 50352368 ~ 50353167 (+) True G2091093
TU2391495 other upstream 1426506 50082063 ~ 50087691 (+) True G2090638

Expression Profile