RNA id: TU2393269


Basic Information

Item Value
RNA id TU2393269
length 309
lncRNA type inter_gene
GC content 0.40
exon number 1
gene id G2092135
representative True

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 51524232 ~ 51524540 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

ggtccagagtaacgctgaggtccttcacagttttatttgagacgactgtacaaccattaagattcattgtcagattcaacagaagatctctttgtttcttgggacctagaacaagcatctctgttttgtccgagtttaaaagtagaaagtttgcagccatccacttccttatgtctgaaacacatgcttctagcaagggcaattttggggcttcaccatgtttcattgaaatgtacagctgtgtgtcatccgcatagcagtgaaagttaacattatgttttcgaataacatccccaagaggtaaaatat

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU2393087 lncRNA upstream 9819 51514197 ~ 51514413 (+) True G2091972
TU2393062 lncRNA upstream 62588 51461434 ~ 51461644 (+) True G2091952
TU2393059 lncRNA upstream 65074 51458893 ~ 51459158 (+) True G2091949
TU2393058 lncRNA upstream 65655 51458322 ~ 51458577 (+) True G2091948
TU2393053 lncRNA upstream 70246 51453754 ~ 51453986 (+) True G2091943
TU2393276 lncRNA downstream 2461 51527001 ~ 51527298 (+) True G2092139
XM_036965479.1 mRNA upstream 13782 51473520 ~ 51510450 (+) True LOC110508131
XM_036965475.1 mRNA upstream 14686 51473520 ~ 51509546 (+) False LOC110508131
TU2393075 other upstream 53841 51469888 ~ 51470391 (+) True G2091960
TU2392994 other upstream 153469 51369764 ~ 51370763 (+) False G2091895
TU2392995 other upstream 153469 51369934 ~ 51370763 (+) True G2091895
TU2392024 other upstream 1171065 50352368 ~ 50353167 (+) True G2091093
TU2391495 other upstream 1436541 50082063 ~ 50087691 (+) True G2090638

Expression Profile