RNA id: TU2430463



Basic Information


Item Value
RNA id TU2430463
length 387
RNA type TUCP
GC content 0.46
exon number 1
gene id G2125723
representative True

Chromosome Information


Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 28885468 ~ 28885854 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ccacatatcctgaggctgcattcattgtagctggggattttaacattgggatatgttccgcattgcgtcaaacaacattgacgaatacgctgattcggtgagcgagtttattagcaagtgcatcggcgatgtcgtacccacagcaactattaaaacattcccaaaccagaaaccgtggattgatggcagcattcccgCGAAACTAAAAGCGCGAagcactgcttttaatcagggcaaggtgaccagaaacatgaccgaatacaaacagtgtagctattccctccgcaaggcaatcaaacaagctaagcgtcagtatagagacaaagtagagtcgcaattcaacagctcagacacaagaggtatgcggcagggtctacagtcaatcac

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2430448 lncRNA downstream 19919 28865167 ~ 28865549 (-) True G2125708
TU2430439 lncRNA downstream 34118 28851147 ~ 28851350 (-) True G2125699
TU2430438 lncRNA downstream 34439 28850786 ~ 28851029 (-) True G2125698
TU2430436 lncRNA downstream 40590 28844639 ~ 28844878 (-) True G2125696
TU2430425 lncRNA downstream 74195 28810997 ~ 28811273 (-) True G2125685
TU2430465 lncRNA upstream 1483 28887337 ~ 28888071 (-) True G2125725
TU2430406 lncRNA upstream 15564 28901418 ~ 28902037 (-) True G2125667
TU2430468 lncRNA upstream 18347 28904201 ~ 28904458 (-) True G2125728
TU2430487 lncRNA upstream 46805 28932659 ~ 28991064 (-) True G2125745
TU2430500 lncRNA upstream 63486 28949340 ~ 28954746 (-) True G2125754
XM_021589731.2 mRNA downstream 23098 28860725 ~ 28862370 (-) True LOC110508863
XM_021589728.2 mRNA downstream 44743 28817604 ~ 28840725 (-) False LOC110508860
XM_021589729.2 mRNA downstream 44743 28817604 ~ 28840725 (-) True LOC110508860
XM_021589723.2 mRNA downstream 125288 28757578 ~ 28760180 (-) False dusp12
XM_036966715.1 mRNA downstream 125288 28757578 ~ 28760180 (-) True dusp12
XM_021589730.2 mRNA upstream 7961 28893815 ~ 28901239 (-) True LOC110508862
XR_005040254.1 mRNA upstream 97245 28983099 ~ 28985289 (-) False LOC110508212
XM_036966774.1 mRNA upstream 97245 28983099 ~ 29003237 (-) True LOC110508212
XM_021589736.2 mRNA upstream 140154 29026008 ~ 29028895 (-) True LOC110508867
XM_021589737.2 mRNA upstream 159712 29045566 ~ 29073745 (-) False LOC110508868
TU2429949 other downstream 192998 28692139 ~ 28692470 (-) True G2125290
TU2429906 other downstream 199733 28627055 ~ 28685735 (-) True G2125253
TU2429926 other downstream 222042 28662708 ~ 28663426 (-) True G2125270
TU2429842 other downstream 333954 28544941 ~ 28551514 (-) False G2125203
TU2429843 other downstream 333954 28544941 ~ 28551514 (-) True G2125203
TU2430562 other upstream 192185 29078039 ~ 29078744 (-) True G2125813
TU2430565 other upstream 232830 29118684 ~ 29123742 (-) True LOC118944842
TU2432085 other upstream 1515359 30401213 ~ 30401807 (-) True LOC110508917
TU2432121 other upstream 1548581 30434435 ~ 30434854 (-) True G2127177
TU2432439 other upstream 1667735 30553589 ~ 30555187 (-) True G2127455

Expression Profile