RNA id: TCONS_00006211


Basic Information

Item Value
RNA id TCONS_00006211
length 2706
RNA type mRNA
GC content 0.52
exon number 8
gene id XLOC_003148
representative False

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 2596667 ~ 2609824 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

GCACTTTttacataattaataaaaaacaaagcggctgcttgccatcgcaacagcaacaagatccaatggacagccgatcgctttcactcctaaatggcggaatccggggctgttgctgggcgctcgCCTCtaggtcattctaagctctttgatgaCAGAAAAGATGACTTAAACGGAAGTGACGTTCCCGCGCTGCTGCTGCTGTACCCGGAAGTGAACAGGAATGAAGAGAGAAGGACAGTGAAAGCAGCTAAAGATAGGCGAGAAGACGGACTGAGCTGCTTTATACTCGTTTTACACCCGAGATCAGCTGTACCGCCTGTACGCCGTTCGTTTACCGTAGTGCTGCAGCAACGCTAGCTGTTGCAGCTTCTCTGTTAGCATATCCGCTAAAGCAACACAGCACCGCAAATGAAGAGATTAAACacatataaagacaataagaCATAAACACTGAGGAGAAACACAAGCTGTGTCTGTAAAGCATCTGTTGGCAGCAGCTGGAGAGTCGATGCTAATGCACTTTATCAGGACGGAGAGTTCAGCGTTCACAATACTGCTGTGATTCGCAAATGTCCACCTCTGATCTTCTGCAATGCTGGACATGCTGAAGACCCCCGGTGGTAGTGTTTCCTTTGTAAATATGAGACGGATGATAAATGCAATGCACGCATGTCTAAGTCTGCTGCCGCCCTGAAGCTCGTGATGGATCTTTTAAGCGTGAAGGAGTGAATGTTCAGGTATTTGAGCAAGATGGAAGCGGATATGGCTGTACACTGGGATACAGTAGAGGAAAACACTGACCGTGAGACTCCCAGTGTGTCTTTGGCCAGTTCGTATCTTGAAAACGACACGCATCACGGACCCTTCGAGTGTGAACATGAAGCAATGGACGATTTCGATTGCGAATTCCCAGATGAAGACTTTGATTTAGATGAGAATGAAGAACAAAACGCCAAAACCGAAGATCTGATTGACAATCAAGCGGAGGATGAGGAGAAATCGGATGAGTTACGGGACGAAGGAGAAACTAAATCCCGGAATGCTGGATCCGGGAGGAAGGGAAAGTCCAAGAAGAGCGGATTGGGGACGGGATTTTATGATCAAACCCAATCTTggacatcatcatcctcatcatccatGCCTCATAAATCCTTCCTTGCATCCAGCAGACATAAGCAGGTGAGACGACGCAACCACCATCTGCACAATCACAGCCGCGTGCGCAGGAAAAACGGGATCCCGCTGGTCATGGTGTGTCGGGATTTCCTGTCGGATTTCGTCAGTCCTTGGTGCATCTCCTGCATTCATATGTTCGTAGAGCTCATTATTTCTCTGACGCACCGCTGTGGCCTCCTGGTGGAGTCGTCTGGAATTGCACTGTACGATTTTGGCACTCAAATGCTTTCTAAGGTCACCGATATTCCAGGCTTGACGCAGGACATGAGGCGGATCGTGGACTGGAGCCGGTGTTGGACTGTAGCTTTAATTGACGGGATCGTCCGGTCTACTTGTAAAGCTCGAAACTCTCTTCTTTCCACTTTAGGATTTGTCAGAGTAGCTCTAAGCGCAGGATCTCAGATGATGAAGTGTGTTGTTGGAAGGCTGGCGGGAGAGAGGGGACGGAAATGGTGGCTTGCGTTTCAGAGCAGCAGGATTTGGAGGAAAGTCTCGGATCTGTGTGTGAGGATTCGTGGCTGGCGCTTTAAACGAGGCGCTGGGAGCGAAAACTCAAATCCAGAGTCTCCTAACAGGGGAGCAGAGAAGTGGCAACCTGGTGAGGAGCTGCAGAGGCTGCTGGCACTGGCCAAGATCCCTGAAGAGGAGTTGGACCCGTTTAATGTTCTGGGAGTGGATGTTCATGCCACTGAGTCTGAGCTGAAGAGAGCGTACAGACAGCTGGCGGTGCAGGTTCATCCTGACAAAAACAAGCACCCGGGGGCTGGAGAGGCGTTCAAGGTGTTGAGAGCAGCGTGGGACATCGTCAGCAATCCAGAGACGCGGAGAGAGTATGAACTGAAGCGAATGGCAGCTACGGAGCTTTCCAAATCCATGAACGAGTTCCTGACCAAACTACAGGACGACCTGAAGGAAGCCATGAACACCATGATGTGCACTAAATGTGAAGGCAAGCACAAGCGCTTTGAGATGGACCGAGAGCCCGGCGAGGCTCGATTCTGTGCTGAATGTAATAAATGGCACGGTGCCGAGGAGGGAGACCTGTGGGCCGAGTCCAGCATGCTGGGACTGCGCATTACATTCTTCGCATTCATGGACGGAAAAGTCTTTGACATCACTGAGTGGGCAGGCTGTCAGCGGATCAGCATCTCTCCAGACACACACCGAGTGCCGTATCACATCTCCTTCGGCTCTAAAGGTAGCAGTGGGCCCAGCCGCCACAGATCATCCTCAGATCACGCAGCAGGCGGGGGTTCTCCAGCAGACCTGCAGGATTTCTTCAACCGCTTCTTCCAGACTGGCTCTCCCAGTGACGCGTCTGCAAACGGAGGATTCTTCCCCGCAGGAAACCCTCCTCATCACGGCCCCGGACCCTCCGCTGGAGCTCCTCCCATGTTTTCAGGATCTCCTCCTCAGCCGGGCTTTTTCAGCGCCGGGGCTCAGCGTAGCGATGCTAGCGAACACTGGACTGAAGGAGCAAAACCTCCACGCCGCCGCAAGAAAGTGCGCAAACCGTTCCAGCGCTGA

Function

GO: NA

KEGG:

id description
ko03110 Chaperones and folding catalysts

ZFIN:

id description
ZDB-GENE-121105-7 Orthologous to human DNAJC14 (DnaJ heat shock protein family (Hsp40) member C14).

Ensembl:

ensembl_id ENSDART00000175330

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00008515 lncRNA upstream 276312 2308209 ~ 2320355 (+) False XLOC_003140
TCONS_00008514 lncRNA upstream 276312 2308209 ~ 2320355 (+) False XLOC_003140
TCONS_00008380 lncRNA upstream 281881 2308218 ~ 2314786 (+) True XLOC_003140
TCONS_00008513 lncRNA upstream 283522 2308209 ~ 2313145 (+) False XLOC_003140
TCONS_00008379 lncRNA upstream 390869 2198677 ~ 2205798 (+) False XLOC_003139
TCONS_00006213 lncRNA downstream 5559 2615070 ~ 2616023 (+) True XLOC_003149
TCONS_00006224 lncRNA downstream 101046 2710557 ~ 2730438 (+) False XLOC_003154
TCONS_00006228 lncRNA downstream 218042 2827553 ~ 2828675 (+) True XLOC_003156
TCONS_00008381 lncRNA downstream 320668 2930179 ~ 2930574 (+) True XLOC_003157
TCONS_00008516 lncRNA downstream 593976 3203487 ~ 3206698 (+) True XLOC_003160
TCONS_00006210 mRNA upstream 29975 2554856 ~ 2566692 (+) True XLOC_003147
TCONS_00006209 mRNA upstream 83574 2506516 ~ 2513093 (+) False XLOC_003146
TCONS_00006208 mRNA upstream 83574 2506516 ~ 2513093 (+) True XLOC_003146
TCONS_00006207 mRNA upstream 129788 2458264 ~ 2466879 (+) True XLOC_003145
TCONS_00006206 mRNA upstream 150321 2434262 ~ 2446346 (+) True XLOC_003144
TCONS_00006214 mRNA downstream 24232 2633743 ~ 2641308 (+) False XLOC_003150
TCONS_00006216 mRNA downstream 32502 2642013 ~ 2649496 (+) True XLOC_003150
TCONS_00006217 mRNA downstream 40153 2649664 ~ 2684595 (+) False XLOC_003151
TCONS_00006218 mRNA downstream 40380 2649891 ~ 2683979 (+) True XLOC_003151
TCONS_00006219 mRNA downstream 75601 2685112 ~ 2690933 (+) False XLOC_003152
TCONS_00006199 other upstream 405937 2190621 ~ 2190730 (+) True XLOC_003138
TCONS_00006172 other upstream 1050436 1546117 ~ 1546231 (+) True XLOC_003126
TCONS_00006169 other upstream 1067340 1522179 ~ 1529327 (+) False XLOC_003124
TCONS_00006161 other upstream 1865744 730807 ~ 730923 (+) True XLOC_003118
TCONS_00006147 other upstream 2225227 371322 ~ 371440 (+) True XLOC_003107
TCONS_00006215 other downstream 24280 2633791 ~ 2649394 (+) False XLOC_003150
TCONS_00006226 other downstream 135553 2745064 ~ 2747797 (+) True XLOC_003154
TCONS_00006233 other downstream 567175 3176686 ~ 3176770 (+) True XLOC_003159
TCONS_00006246 other downstream 889679 3499190 ~ 3514108 (+) False XLOC_003165
TCONS_00006254 other downstream 1356216 3965727 ~ 3968309 (+) True XLOC_003171

Expression Profile

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