RNA id: TCONS_00062924



Basic Information


Item Value
RNA id TCONS_00062924
length 434
lncRNA type antisense
GC content 0.42
exon number 2
gene id XLOC_032209
representative True

Chromosome Information


Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 39666347 ~ 39667572 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence


cgcGCACAGACAGCATGACAACCGCAGCCCGTCAGTAAATTAATTCACTGACAGAAAAACAGCAGCACCTGATGCTACTCGGACATACGAAAcgatgatgttttttatttttaacacaatttaccTGATCAAGCTGAGTTTTCAAGCCTTCTAATTGTGGAAGAGACAATTCAGTGAGATTCACCGCcatgttgacaataaaagaggATTCACCATTAAACCTGGCCGTTCAGCACATAAGAATCACATCAGATCAGGTACGTCAGATATTTGTACGTCTCTGAAAACGCTGTCCCTGACATTTTGAAGACTTATGGGAACACCGATTTCAGTGTTTACAGTCCTTGTTGCCTGTCGGTTTATCCATCAGTCTGCAGTGACAGATGACCAATTCATGTTTTTCCTCCATGTGTACTCCTTTACTAGCACATCCC

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000162802

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TCONS_00064909 lncRNA upstream 128341 39532478 ~ 39538006 (+) False XLOC_032208
TCONS_00064908 lncRNA upstream 128341 39532478 ~ 39538006 (+) False XLOC_032208
TCONS_00064907 lncRNA upstream 128341 39532478 ~ 39538006 (+) False XLOC_032208
TCONS_00064910 lncRNA upstream 128341 39533494 ~ 39538006 (+) False XLOC_032208
TCONS_00064675 lncRNA upstream 128341 39533494 ~ 39538006 (+) False XLOC_032208
TCONS_00062925 lncRNA downstream 32628 39700200 ~ 39717558 (+) True XLOC_032210
TCONS_00064912 lncRNA downstream 206952 39874524 ~ 39882227 (+) True XLOC_032213
TCONS_00064913 lncRNA downstream 337023 40004595 ~ 40017137 (+) True XLOC_032216
TCONS_00062939 lncRNA downstream 781062 40448634 ~ 40451840 (+) True XLOC_032220
TCONS_00062941 lncRNA downstream 808139 40475711 ~ 40481661 (+) False XLOC_032222
TCONS_00062923 mRNA upstream 124899 39536596 ~ 39541448 (+) False XLOC_032208
TCONS_00062922 mRNA upstream 157972 39506043 ~ 39508375 (+) True XLOC_032207
TCONS_00062921 mRNA upstream 162966 39499623 ~ 39503381 (+) True XLOC_032206
TCONS_00062920 mRNA upstream 168373 39493864 ~ 39497974 (+) True XLOC_032205
TCONS_00062918 mRNA upstream 290825 39370615 ~ 39375522 (+) False XLOC_032204
TCONS_00062926 mRNA downstream 144903 39812475 ~ 39831089 (+) True XLOC_032211
TCONS_00062927 mRNA downstream 168902 39836474 ~ 39866670 (+) True XLOC_032212
TCONS_00062928 mRNA downstream 237449 39905021 ~ 39912440 (+) True XLOC_032214
TCONS_00062929 mRNA downstream 255480 39923052 ~ 39991554 (+) False XLOC_032215
TCONS_00062933 mRNA downstream 263253 39930825 ~ 39990998 (+) False XLOC_032215
TCONS_00062919 other upstream 294472 39370620 ~ 39371875 (+) True XLOC_032204
TCONS_00062894 other upstream 808045 38845676 ~ 38858302 (+) False XLOC_032191
TCONS_00062893 other upstream 884189 38773418 ~ 38782158 (+) True XLOC_032190
TCONS_00062884 other upstream 1289136 38377091 ~ 38377211 (+) True XLOC_032186
TCONS_00062883 other upstream 1578736 38087495 ~ 38087611 (+) True XLOC_032184
TCONS_00062936 other downstream 376043 40043615 ~ 40049445 (+) True XLOC_032217
TCONS_00062945 other downstream 878293 40545865 ~ 40546975 (+) False XLOC_032225
TCONS_00062987 other downstream 1527115 41194687 ~ 41194801 (+) True XLOC_032251
TCONS_00062995 other downstream 1787219 41454791 ~ 41454873 (+) True XLOC_032256
TCONS_00062996 other downstream 1796213 41463785 ~ 41493470 (+) False XLOC_032257

Expression Profile


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