Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00006366 |
| length | 574 |
| lncRNA type | retained_intron |
| GC content | 0.42 |
| exon number | 3 |
| gene id | XLOC_003226 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007122.7 |
| NCBI id | CM002895.2 |
| chromosome length | 45484837 |
| location | 7432533 ~ 7737642 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0007186 | G protein-coupled receptor signaling pathway | biological_process |
| GO:0007189 | adenylate cyclase-activating G protein-coupled receptor signaling pathway | biological_process |
| GO:0007420 | brain development | biological_process |
| GO:0007165 | signal transduction | biological_process |
| GO:0007166 | cell surface receptor signaling pathway | biological_process |
| GO:0043005 | neuron projection | cellular_component |
| GO:0005887 | integral component of plasma membrane | cellular_component |
| GO:0016020 | membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0004888 | transmembrane signaling receptor activity | molecular_function |
| GO:0030246 | carbohydrate binding | molecular_function |
| GO:0004930 | G protein-coupled receptor activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-000607-49 | Predicted to enable G protein-coupled receptor activity. Predicted to be involved in adenylate cyclase-activating G protein-coupled receptor signaling pathway and brain development. Predicted to act upstream of or within G protein-coupled receptor signaling pathway and cell surface receptor signaling pathway. Predicted to be located in axon and membrane. Predicted to be integral component of membrane. Predicted to be active in neuron projection. Predicted to be integral component of plasma membrane. Is expressed in brain; eye; and tail bud. Orthologous to human ADGRL2 (adhesion G protein-coupled receptor L2). |
| ensembl_id | ENSDART00000165326 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00008546 | lncRNA | upstream | 434029 | 7281239 ~ 7286310 (+) | True | XLOC_003224 |
| TCONS_00006350 | lncRNA | upstream | 500979 | 7214674 ~ 7219360 (+) | True | XLOC_003221 |
| TCONS_00008544 | lncRNA | upstream | 568332 | 7149669 ~ 7152007 (+) | False | XLOC_003217 |
| TCONS_00006367 | lncRNA | downstream | 60188 | 7782514 ~ 7783314 (+) | True | XLOC_003227 |
| TCONS_00008388 | lncRNA | downstream | 103027 | 7825353 ~ 7826072 (+) | True | XLOC_003228 |
| TCONS_00008547 | lncRNA | downstream | 157816 | 7880142 ~ 7954546 (+) | False | XLOC_003229 |
| TCONS_00006368 | lncRNA | downstream | 157851 | 7880177 ~ 7971030 (+) | False | XLOC_003229 |
| TCONS_00008548 | lncRNA | downstream | 184681 | 7907007 ~ 7954546 (+) | True | XLOC_003229 |
| TCONS_00006360 | mRNA | upstream | 378532 | 7324704 ~ 7341807 (+) | True | XLOC_003225 |
| TCONS_00006358 | mRNA | upstream | 440080 | 7277032 ~ 7280259 (+) | False | XLOC_003223 |
| TCONS_00006356 | mRNA | upstream | 440675 | 7276983 ~ 7279664 (+) | False | XLOC_003223 |
| TCONS_00006355 | mRNA | upstream | 440781 | 7276824 ~ 7279558 (+) | False | XLOC_003223 |
| TCONS_00006359 | mRNA | upstream | 440802 | 7277070 ~ 7279537 (+) | True | XLOC_003223 |
| TCONS_00006369 | mRNA | downstream | 407210 | 8129536 ~ 8149796 (+) | False | XLOC_003230 |
| TCONS_00006370 | mRNA | downstream | 407354 | 8129680 ~ 8150894 (+) | True | XLOC_003230 |
| TCONS_00006371 | mRNA | downstream | 430546 | 8152872 ~ 8157495 (+) | False | XLOC_003231 |
| TCONS_00006372 | mRNA | downstream | 430556 | 8152882 ~ 8157035 (+) | False | XLOC_003231 |
| TCONS_00006373 | mRNA | downstream | 430642 | 8152968 ~ 8161149 (+) | True | XLOC_003231 |
| TCONS_00006353 | other | upstream | 445961 | 7262004 ~ 7274378 (+) | False | XLOC_003222 |
| TCONS_00006343 | other | upstream | 569433 | 7150820 ~ 7150906 (+) | True | XLOC_003218 |
| TCONS_00006342 | other | upstream | 569699 | 7150547 ~ 7150640 (+) | True | XLOC_003217 |
| TCONS_00006341 | other | upstream | 569973 | 7150274 ~ 7150366 (+) | False | XLOC_003217 |
| TCONS_00006340 | other | upstream | 570257 | 7149989 ~ 7150082 (+) | False | XLOC_003217 |
| TCONS_00006384 | other | downstream | 2176187 | 9898513 ~ 9898630 (+) | True | XLOC_003238 |
| TCONS_00006409 | other | downstream | 3545564 | 11267890 ~ 11274557 (+) | False | XLOC_003248 |
| TCONS_00006412 | other | downstream | 3549608 | 11271934 ~ 11274600 (+) | False | XLOC_003248 |
| TCONS_00006417 | other | downstream | 3623477 | 11345803 ~ 11346099 (+) | True | XLOC_003250 |
| TCONS_00006423 | other | downstream | 3650560 | 11372886 ~ 11373182 (+) | True | XLOC_003255 |
