Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00006461 |
| length | 1095 |
| RNA type | mRNA |
| GC content | 0.47 |
| exon number | 7 |
| gene id | XLOC_003284 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007122.7 |
| NCBI id | CM002895.2 |
| chromosome length | 45484837 |
| location | 12175162 ~ 12184543 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0005882 | intermediate filament | cellular_component |
| GO:0005198 | structural molecule activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-130530-566 | Predicted to enable structural molecule activity. Predicted to be located in intermediate filament. Human ortholog(s) of this gene implicated in autosomal recessive woolly hair 3. Orthologous to several human genes including KRT20 (keratin 20). |
| ensembl_id | ENSDART00000041914 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00006458 | lncRNA | upstream | 9537 | 12166486 ~ 12166790 (+) | True | XLOC_003282 |
| TCONS_00008571 | lncRNA | upstream | 272817 | 11891591 ~ 11903510 (+) | False | XLOC_003278 |
| TCONS_00008393 | lncRNA | downstream | 282506 | 12466766 ~ 12467060 (+) | True | XLOC_003302 |
| TCONS_00006480 | lncRNA | downstream | 309612 | 12493872 ~ 12494177 (+) | True | XLOC_003304 |
| TCONS_00008394 | lncRNA | downstream | 338510 | 12522770 ~ 12523029 (+) | True | XLOC_003307 |
| TCONS_00006494 | lncRNA | downstream | 533849 | 12718109 ~ 12718402 (+) | True | XLOC_003319 |
| TCONS_00006501 | lncRNA | downstream | 560375 | 12744635 ~ 12752361 (+) | False | XLOC_003321 |
| TCONS_00006456 | mRNA | upstream | 84149 | 12052791 ~ 12092178 (+) | True | XLOC_003280 |
| TCONS_00006455 | mRNA | upstream | 196473 | 11974708 ~ 11979854 (+) | True | XLOC_003279 |
| TCONS_00006454 | mRNA | upstream | 326332 | 11842724 ~ 11849995 (+) | True | XLOC_003277 |
| TCONS_00006453 | mRNA | upstream | 371607 | 11797026 ~ 11804720 (+) | True | XLOC_003272 |
| TCONS_00006449 | mRNA | upstream | 394416 | 11751006 ~ 11781911 (+) | False | XLOC_003270 |
| TCONS_00006495 | mRNA | downstream | 535684 | 12719944 ~ 12728353 (+) | False | XLOC_003320 |
| TCONS_00006496 | mRNA | downstream | 535728 | 12719988 ~ 12727230 (+) | False | XLOC_003320 |
| TCONS_00006497 | mRNA | downstream | 535911 | 12720171 ~ 12727529 (+) | False | XLOC_003320 |
| TCONS_00006498 | mRNA | downstream | 536048 | 12720308 ~ 12727651 (+) | True | XLOC_003320 |
| TCONS_00006499 | mRNA | downstream | 560315 | 12744575 ~ 12770546 (+) | False | XLOC_003321 |
| TCONS_00006459 | other | upstream | 4736 | 12171295 ~ 12171591 (+) | True | XLOC_003283 |
| TCONS_00006457 | other | upstream | 13279 | 12162752 ~ 12163048 (+) | True | XLOC_003281 |
| TCONS_00006445 | other | upstream | 662915 | 11504261 ~ 11513412 (+) | False | XLOC_003268 |
| TCONS_00006440 | other | upstream | 713725 | 11462306 ~ 11462602 (+) | True | XLOC_003267 |
| TCONS_00006439 | other | upstream | 715225 | 11460806 ~ 11461102 (+) | True | XLOC_003266 |
| TCONS_00006462 | other | downstream | 3046 | 12187306 ~ 12187602 (+) | True | XLOC_003285 |
| TCONS_00006463 | other | downstream | 5465 | 12189725 ~ 12190024 (+) | True | XLOC_003286 |
| TCONS_00006464 | other | downstream | 24649 | 12208909 ~ 12209205 (+) | True | XLOC_003287 |
| TCONS_00006465 | other | downstream | 31068 | 12215328 ~ 12215628 (+) | True | XLOC_003288 |
| TCONS_00006466 | other | downstream | 39202 | 12223462 ~ 12223758 (+) | True | XLOC_003289 |
