RNA id: TU123556


Basic Information

Item Value
RNA id TU123556
length 215
lncRNA type inter_gene
GC content 0.48
exon number 2
gene id G91827
representative False

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 83806 ~ 423652 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

acagatacacacacacacacacacagacagacacacacacagacacacacacacacacacacacacacacacacacacacacacacacacagacacacacacacacacacacacacacacacacacaaacagagaacacacacatacacacagacacacacacacagacacacacacacacacacacacacacacacacacacacacacacacac

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU123620 lncRNA upstream 11163 330469 ~ 331021 (+) True G91862
TU123584 lncRNA upstream 19327 273138 ~ 322857 (+) False G91842
TU123591 lncRNA upstream 19327 273138 ~ 322857 (+) True G91842
TU123595 lncRNA upstream 19327 273138 ~ 322857 (+) False G91842
TU123588 lncRNA upstream 19541 273138 ~ 322643 (+) False G91842
TU123625 lncRNA downstream 188 364410 ~ 447169 (+) False G91866
TU123628 lncRNA downstream 188 364410 ~ 447169 (+) True G91866
TU123630 lncRNA downstream 9857 374079 ~ 447169 (+) False G91866
TU123646 lncRNA downstream 43565 407787 ~ 452499 (+) True G91877
TU123649 lncRNA downstream 45233 409455 ~ 410825 (+) True G91879
XM_039811808.1 mRNA upstream 182727 141925 ~ 159457 (+) True LOC120565788
XM_039811713.1 mRNA downstream 419977 784199 ~ 808239 (+) True stx6
XM_039811714.1 mRNA downstream 422480 786702 ~ 787874 (+) True LOC120565732
XM_039811715.1 mRNA downstream 422480 786702 ~ 787874 (+) False LOC120565732
XM_039811716.1 mRNA downstream 422480 786702 ~ 787874 (+) False LOC120565732
XM_039811564.1 mRNA downstream 468019 832241 ~ 854498 (+) True wdr18
TU123592 other upstream 24216 273138 ~ 317968 (+) False G91842
TU123552 other upstream 186476 154852 ~ 155708 (+) True G91827
TU123666 other downstream 144919 509141 ~ 566466 (+) False G91887
TU123686 other downstream 177469 541691 ~ 542909 (+) True G91897
TU123696 other downstream 216585 580807 ~ 593877 (+) True G91903
TU123859 other downstream 358151 722373 ~ 758976 (+) True G92019
TU123860 other downstream 391373 755595 ~ 758976 (+) False G92019

Expression Profile