RNA id: TU123587


Basic Information

Item Value
RNA id TU123587
length 213
lncRNA type inter_gene
GC content 0.50
exon number 4
gene id G91842
representative False

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 257904 ~ 342692 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

ctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgagtgtgtgtgtgtctgtgtgtgtgtctgtgtgtgtgtctctgtgtgtgtgtctctctgtgtgtgtgtctgtgtgtgtgtctctgtgtgtgtgtctctgtgtgtgtgtctgtgtgtgtgtgtgtctctctgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtctgtgtctg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU123593 lncRNA upstream 7093 257904 ~ 306121 (+) False G91842
TU123615 lncRNA upstream 22518 284398 ~ 290696 (+) True G91857
TU123586 lncRNA upstream 38946 257904 ~ 274268 (+) False G91842
TU123597 lncRNA upstream 68373 196596 ~ 244841 (+) True G91843
TU123553 lncRNA upstream 112424 126328 ~ 200790 (+) False G91827
TU123625 lncRNA downstream 21718 364410 ~ 447169 (+) False G91866
TU123628 lncRNA downstream 21718 364410 ~ 447169 (+) True G91866
TU123630 lncRNA downstream 31387 374079 ~ 447169 (+) False G91866
TU123646 lncRNA downstream 65095 407787 ~ 452499 (+) True G91877
TU123649 lncRNA downstream 66763 409455 ~ 410825 (+) True G91879
XM_039811808.1 mRNA upstream 153757 141925 ~ 159457 (+) True LOC120565788
XM_039811713.1 mRNA downstream 441507 784199 ~ 808239 (+) True stx6
XM_039811714.1 mRNA downstream 444010 786702 ~ 787874 (+) True LOC120565732
XM_039811715.1 mRNA downstream 444010 786702 ~ 787874 (+) False LOC120565732
XM_039811716.1 mRNA downstream 444010 786702 ~ 787874 (+) False LOC120565732
XM_039811564.1 mRNA downstream 489549 832241 ~ 854498 (+) True wdr18
TU123552 other upstream 157506 154852 ~ 155708 (+) True G91827
TU123666 other downstream 166449 509141 ~ 566466 (+) False G91887
TU123686 other downstream 198999 541691 ~ 542909 (+) True G91897
TU123696 other downstream 238115 580807 ~ 593877 (+) True G91903
TU123859 other downstream 379681 722373 ~ 758976 (+) True G92019
TU123860 other downstream 412903 755595 ~ 758976 (+) False G92019

Expression Profile