RNA id: TU123626


Basic Information

Item Value
RNA id TU123626
length 272
lncRNA type inter_gene
GC content 0.50
exon number 3
gene id G91866
representative False

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 364410 ~ 447169 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

acacacacacacatacagacagacagacagacagacacacacacacagacacacacacagacagacagacagacacacacacacacagacagacagacagacagacagacagacacacacacacagacagacagacagacacacacacagacagacagacagacagacacacacacagagacacacacacacacacacagacagacagacacacagacagacacacacacacacacacacacacagacacacacacacacacacacacacac

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU123554 lncRNA upstream 22979 337413 ~ 423652 (+) False G91827
TU123649 lncRNA upstream 35806 409455 ~ 410825 (+) True G91879
TU123648 lncRNA upstream 35806 409683 ~ 410825 (+) False G91879
TU123556 lncRNA upstream 82409 342184 ~ 364222 (+) False G91827
TU123587 lncRNA upstream 103939 313214 ~ 342692 (+) False G91842
TU123644 lncRNA downstream 4255 451424 ~ 452499 (+) False G91877
XR_005640316.1 lncRNA downstream 5973 453142 ~ 465715 (+) False LOC120566002
XR_005640315.1 lncRNA downstream 5973 453142 ~ 460605 (+) False LOC120566002
TU123658 lncRNA downstream 6038 453207 ~ 459811 (+) True LOC120566002
TU123663 lncRNA downstream 8540 455709 ~ 457515 (+) True G91887
XM_039811808.1 mRNA upstream 287174 141925 ~ 159457 (+) True LOC120565788
XM_039811713.1 mRNA downstream 337030 784199 ~ 808239 (+) True stx6
XM_039811714.1 mRNA downstream 339533 786702 ~ 787874 (+) True LOC120565732
XM_039811715.1 mRNA downstream 339533 786702 ~ 787874 (+) False LOC120565732
XM_039811716.1 mRNA downstream 339533 786702 ~ 787874 (+) False LOC120565732
XM_039811564.1 mRNA downstream 385072 832241 ~ 854498 (+) True wdr18
TU123592 other upstream 128663 273138 ~ 317968 (+) False G91842
TU123552 other upstream 290923 154852 ~ 155708 (+) True G91827
TU123666 other downstream 61972 509141 ~ 566466 (+) False G91887
TU123686 other downstream 94522 541691 ~ 542909 (+) True G91897
TU123696 other downstream 133638 580807 ~ 593877 (+) True G91903
TU123859 other downstream 275204 722373 ~ 758976 (+) True G92019
TU123860 other downstream 308426 755595 ~ 758976 (+) False G92019

Expression Profile