RNA id: TU123648


Basic Information

Item Value
RNA id TU123648
length 211
lncRNA type inter_gene
GC content 0.35
exon number 2
gene id G91879
representative False

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 409455 ~ 410825 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

tttagttactagttactttagttactccactacattcatctgttccagctttagttactagttactttagttactccgctacattcatctggtacagctttagttactagttactttagttactagttactttagttactccactacattcatctgttccagctttagttactagttactttagttactcctctacattcacctgttccag

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU123556 lncRNA upstream 45461 342184 ~ 364222 (+) False G91827
TU123587 lncRNA upstream 66991 313214 ~ 342692 (+) False G91842
TU123620 lncRNA upstream 78662 330469 ~ 331021 (+) True G91862
TU123595 lncRNA upstream 86826 273138 ~ 322857 (+) False G91842
TU123645 lncRNA downstream 22782 433607 ~ 452499 (+) False G91877
TU123624 lncRNA downstream 35806 446631 ~ 447169 (+) False G91866
TU123626 lncRNA downstream 35806 446631 ~ 447169 (+) False G91866
TU123627 lncRNA downstream 35806 446631 ~ 447169 (+) False G91866
TU123644 lncRNA downstream 40599 451424 ~ 452499 (+) False G91877
XM_039811808.1 mRNA upstream 250226 141925 ~ 159457 (+) True LOC120565788
XM_039811713.1 mRNA downstream 373374 784199 ~ 808239 (+) True stx6
XM_039811714.1 mRNA downstream 375877 786702 ~ 787874 (+) True LOC120565732
XM_039811715.1 mRNA downstream 375877 786702 ~ 787874 (+) False LOC120565732
XM_039811716.1 mRNA downstream 375877 786702 ~ 787874 (+) False LOC120565732
XM_039811564.1 mRNA downstream 421416 832241 ~ 854498 (+) True wdr18
TU123592 other upstream 91715 273138 ~ 317968 (+) False G91842
TU123552 other upstream 253975 154852 ~ 155708 (+) True G91827
TU123666 other downstream 98316 509141 ~ 566466 (+) False G91887
TU123686 other downstream 130866 541691 ~ 542909 (+) True G91897
TU123696 other downstream 169982 580807 ~ 593877 (+) True G91903
TU123859 other downstream 311548 722373 ~ 758976 (+) True G92019
TU123860 other downstream 344770 755595 ~ 758976 (+) False G92019

Expression Profile