RNA id: TU123679


Basic Information

Item Value
RNA id TU123679
length 359
lncRNA type inter_gene
GC content 0.43
exon number 3
gene id G91895
representative False

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 509096 ~ 510112 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

cgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagggtaagggttaaggttaggcatttagttgtgatggttaaggttagggtaagggttaaggttaggcatttagttgtgatggttaaggttagggtaagggttaaggttaggcatttagttgtgatggttaaggtgagggtaagggttaaggttaggcatttagttgtgatggttaaggtgagggtaagggttaaggttaggcatttagttgtgatggttaaggttagggtaagggttaaggttagacatttagttgtgatggttaaggttagggtaaggggctagggaatgcattatgtcaatgactggtccccacaaagatagtgc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU123676 lncRNA upstream 1820 506486 ~ 507276 (+) True G91893
TU123675 lncRNA upstream 8531 500088 ~ 500565 (+) True G91892
XR_005640316.1 lncRNA upstream 43381 453142 ~ 465715 (+) False LOC120566002
TU123682 lncRNA downstream 10375 520487 ~ 604831 (+) False G91896
TU123691 lncRNA downstream 42271 552383 ~ 553627 (+) True G91899
TU123693 lncRNA downstream 45189 555301 ~ 557470 (+) True G91900
TU123692 lncRNA downstream 45624 555736 ~ 557470 (+) False G91900
TU123694 lncRNA downstream 47757 557869 ~ 558813 (+) True G91901
XM_039811808.1 mRNA upstream 349639 141925 ~ 159457 (+) True LOC120565788
XM_039811713.1 mRNA downstream 274087 784199 ~ 808239 (+) True stx6
XM_039811714.1 mRNA downstream 276590 786702 ~ 787874 (+) True LOC120565732
XM_039811715.1 mRNA downstream 276590 786702 ~ 787874 (+) False LOC120565732
XM_039811716.1 mRNA downstream 276590 786702 ~ 787874 (+) False LOC120565732
XM_039811564.1 mRNA downstream 322129 832241 ~ 854498 (+) True wdr18
TU123592 other upstream 191128 273138 ~ 317968 (+) False G91842
TU123552 other upstream 353388 154852 ~ 155708 (+) True G91827
TU123686 other downstream 31579 541691 ~ 542909 (+) True G91897
TU123696 other downstream 70695 580807 ~ 593877 (+) True G91903
TU123859 other downstream 212261 722373 ~ 758976 (+) True G92019
TU123860 other downstream 245483 755595 ~ 758976 (+) False G92019
TU124034 other downstream 658709 1168821 ~ 1170046 (+) True G92146

Expression Profile