RNA id: TU123696


Basic Information

Item Value
RNA id TU123696
length 656
RNA type TUCP
GC content 0.60
exon number 5
gene id G91903
representative True

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 580807 ~ 593877 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

gtttttctgtctcggAGACAAAGTGTAAAGTCTTCTCCGTGTTTCTGTCTCCGACCTCCTCACGGGTTTTGGAGCCAGAGAGCCAGTGAGATATTGTGATATCTTCTCCACCCTCCTCCTTTCGCCCCTACGACTGACCATCCTAAAGACTTTCTATCAGGACTCTTGATAGCGGACCAGAAGCCCCTGATCCCAGAGCAACCCCACCCCCTATCTGGTCCAGTCTGGGCCCAGTTCTGGTCCAGTCTCAGTCCAGTCTGCGCTGCAGGATGGCAGGTCTGCCGCTCTGTTTGGCTGTGATGGCCACCACGCTCCTGCTCACCCTCAGAGCCCACGCTGCAGGTCAGAATCCGGACCACGTCCTGCAGGGGACGGGGGTGAAACCAGAGGCTCGGCGGCCCGGCGAGGACTCGACCATTGCGCCCGAGGACGCCGCCCGTTTCCTCAGCTGCTACTGCTCCGGACACTGTCCCGAGGACGCCACCAACAACACCTGCCAgaCCAACGGTCAGTGTTTCGCCATCATCGAGGAGGATGAGCAGGGCGAGGCCATCCTCGCCTCCGGCTGCATGAAGTATGAAGGCTCACACTTCCAGtgcaagGACTCTCCCAACGCTCAGCCCAGGAGGACCATCGAGTGCTGCAACACCGACTTC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU123665 lncRNA upstream 14341 455709 ~ 566466 (+) False G91887
TU123664 lncRNA upstream 14341 565606 ~ 566466 (+) False G91887
TU123667 lncRNA upstream 14341 565691 ~ 566466 (+) False G91887
TU123694 lncRNA upstream 21994 557869 ~ 558813 (+) True G91901
TU123693 lncRNA upstream 23337 555301 ~ 557470 (+) True G91900
TU123683 lncRNA downstream 8908 602785 ~ 604831 (+) True G91896
TU123851 lncRNA downstream 90858 684735 ~ 685052 (+) True G92013
TU123853 lncRNA downstream 100556 694433 ~ 694750 (+) True G92015
TU123857 lncRNA downstream 128238 722115 ~ 773957 (+) False G92018
TU123865 lncRNA downstream 171577 765454 ~ 768674 (+) False G92022
XM_039811808.1 mRNA upstream 421350 141925 ~ 159457 (+) True LOC120565788
XM_039811713.1 mRNA downstream 190322 784199 ~ 808239 (+) True stx6
XM_039811714.1 mRNA downstream 192825 786702 ~ 787874 (+) True LOC120565732
XM_039811715.1 mRNA downstream 192825 786702 ~ 787874 (+) False LOC120565732
XM_039811716.1 mRNA downstream 192825 786702 ~ 787874 (+) False LOC120565732
XM_039811564.1 mRNA downstream 238364 832241 ~ 854498 (+) True wdr18
TU123666 other upstream 14341 509141 ~ 566466 (+) False G91887
TU123686 other upstream 37898 541691 ~ 542909 (+) True G91897
TU123592 other upstream 262839 273138 ~ 317968 (+) False G91842
TU123552 other upstream 425099 154852 ~ 155708 (+) True G91827
TU123859 other downstream 128496 722373 ~ 758976 (+) True G92019
TU123860 other downstream 161718 755595 ~ 758976 (+) False G92019
TU124034 other downstream 574944 1168821 ~ 1170046 (+) True G92146
TU124050 other downstream 609010 1202887 ~ 1204046 (+) True G92157
TU124060 other downstream 626933 1220810 ~ 1224808 (+) False trmt13

Expression Profile