RNA id: TU123925


Basic Information

Item Value
RNA id TU123925
length 285
lncRNA type sense_over
GC content 0.50
exon number 3
gene id G92066
representative True

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 900221 ~ 984045 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

tcccttctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtctgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtggctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtctgtgtctgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtctgtgtctgtgtgtgtgtgtgtg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU123920 lncRNA upstream 62594 860473 ~ 860703 (+) True G92062
TU123876 lncRNA upstream 97251 824574 ~ 826046 (+) True G92029
TU123874 lncRNA upstream 104972 816582 ~ 818325 (+) True G92027
TU123856 lncRNA upstream 149340 769473 ~ 773957 (+) True G92018
TU123869 lncRNA upstream 154623 765454 ~ 768674 (+) True G92022
TU123968 lncRNA downstream 17055 964768 ~ 965650 (+) True G92093
TU123969 lncRNA downstream 21278 968991 ~ 969912 (+) True G92094
TU123970 lncRNA downstream 21278 968991 ~ 1063760 (+) False G92094
TU123971 lncRNA downstream 23160 970873 ~ 971521 (+) True G92095
TU123979 lncRNA downstream 61009 1008722 ~ 1112847 (+) True G92102
XM_039811564.1 mRNA upstream 68799 832241 ~ 854498 (+) True wdr18
XM_039811713.1 mRNA upstream 115058 784199 ~ 808239 (+) True stx6
XM_039812306.1 mRNA downstream 35938 983651 ~ 1009213 (+) True med16
XM_039811799.1 mRNA downstream 63034 1010747 ~ 1025143 (+) True plppr3b
XM_039811451.1 mRNA downstream 274620 1222333 ~ 1228679 (+) True trmt13
XM_039812460.1 mRNA downstream 374692 1322405 ~ 1380914 (+) True LOC120566171
XM_039811453.1 mRNA downstream 590286 1537999 ~ 1574777 (+) True LOC120565564
TU123859 other upstream 164321 722373 ~ 758976 (+) True G92019
TU123860 other upstream 164321 755595 ~ 758976 (+) False G92019
TU123696 other upstream 329420 580807 ~ 593877 (+) True G91903
TU123666 other upstream 356831 509141 ~ 566466 (+) False G91887
TU124034 other downstream 221108 1168821 ~ 1170046 (+) True G92146
TU124050 other downstream 255174 1202887 ~ 1204046 (+) True G92157
TU124060 other downstream 273097 1220810 ~ 1224808 (+) False trmt13
TU124057 other downstream 273660 1221373 ~ 1224808 (+) False trmt13
TU124067 other downstream 293674 1241387 ~ 1256194 (+) True G92169

Expression Profile