RNA id: TU126743


Basic Information

Item Value
RNA id TU126743
length 307
lncRNA type inter_gene
GC content 0.52
exon number 3
gene id G93932
representative True

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 7322066 ~ 7323426 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

GGGCACCAACATATCCAGTCCTCCCGGGCCTGTCACGTTCCACTTACTGCGTTGACTGTTGTCCTTTAGGATCGCCTCATTTCCCTTACAGATCACCTTCTGGTCTTGTTTGAAGTCACACAGGGCTTTGACGATGGTGGGGCTGCCGCTCTTCTCTTCAGGGTTTCTGGGTTTCAGCCTCACGATGTTCTTGGACTTGCTGACCAGATGTTGAACCTGCCtcttgttttccataatcttctctttctccctCTCCAGACCCCTGAGGAGCTCCACTAGGTTGTCCAGGGGAGTGTTCTTGTTACAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU126742 lncRNA upstream 611 7318842 ~ 7321455 (+) True G93931
TU126703 lncRNA upstream 34913 7271936 ~ 7287153 (+) True G93912
TU126682 lncRNA upstream 86347 7233146 ~ 7235719 (+) True G93906
TU126671 lncRNA upstream 165347 7156335 ~ 7156719 (+) True G93896
TU126663 lncRNA upstream 187634 7131348 ~ 7134432 (+) True G93888
TU126744 lncRNA downstream 3745 7327171 ~ 7327686 (+) True G93933
XR_005640327.1 lncRNA downstream 70947 7394373 ~ 7395278 (+) True LOC120566054
TU126801 lncRNA downstream 201564 7524990 ~ 7525343 (+) True G93985
TU126802 lncRNA downstream 233828 7557254 ~ 7615427 (+) True G93986
TU126854 lncRNA downstream 555493 7878919 ~ 7883828 (+) False LOC120565294
XM_039811515.1 mRNA upstream 36307 7263547 ~ 7285759 (+) True LOC120565613
XM_039811275.1 mRNA upstream 194794 7108149 ~ 7127272 (+) True igfbp3
XM_039811274.1 mRNA upstream 254132 7007170 ~ 7067934 (+) True si:ch211-191a24.3
XM_039811272.1 mRNA upstream 350766 6965547 ~ 6971300 (+) True si:ch211-191a24.4
XM_039810253.1 mRNA upstream 598789 6672071 ~ 6723277 (+) False ghrhrb
XM_039811822.1 mRNA downstream 30422 7353848 ~ 7379344 (+) True LOC120565797
XM_039812274.1 mRNA downstream 74712 7398138 ~ 7413692 (+) True LOC120566053
XM_039812276.1 mRNA downstream 74714 7398140 ~ 7413692 (+) False LOC120566053
XM_039812533.1 mRNA downstream 92015 7415441 ~ 7423820 (+) True LOC120566212
XM_039812332.1 mRNA downstream 256766 7580192 ~ 7581837 (+) True foxq1b
TU126420 other upstream 953712 6354897 ~ 6368354 (+) False rhpn1
TU126347 other upstream 1108049 6202085 ~ 6214017 (+) True G93638
TU126315 other upstream 1281947 6035369 ~ 6040119 (+) False G93613
TU125908 other upstream 2608881 4711561 ~ 4713185 (+) False trmt1l
XR_005640230.1 other upstream 3028176 4290341 ~ 4293890 (+) False LOC120565391
TU126750 other downstream 26384 7349810 ~ 7350587 (+) True G93938
TU126885 other downstream 575246 7898672 ~ 7905247 (+) False LOC120565614
TU126919 other downstream 913944 8237370 ~ 8245821 (+) False G94073
TU126920 other downstream 913944 8237370 ~ 8254575 (+) True G94073
TU127064 other downstream 1823736 9147162 ~ 9159695 (+) True G94199

Expression Profile