Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU127711 |
| length | 302 |
| lncRNA type | inter_gene |
| GC content | 0.48 |
| exon number | 1 |
| gene id | G94677 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053120.1 |
| NCBI id | CM020917.1 |
| chromosome length | 41568296 |
| location | 11104221 ~ 11104522 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| id | name | namespace |
|---|---|---|
| GO:0021591 | ventricular system development | biological_process |
| GO:0021592 | fourth ventricle development | biological_process |
| GO:0007420 | brain development | biological_process |
| GO:0030902 | hindbrain development | biological_process |
| GO:0060322 | head development | biological_process |
| GO:0005102 | signaling receptor binding | molecular_function |
| GO:0005515 | protein binding | molecular_function |
| GO:0005179 | hormone activity | molecular_function |
| GO:0030545 | receptor regulator activity | molecular_function |
| GO:0048018 | receptor ligand activity | molecular_function |
| GO:0098772 | molecular function regulator | molecular_function |
| id | description |
|---|---|
| ko04080 | Neuroactive ligand-receptor interaction |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU127710 | lncRNA | upstream | 1406 | 11102476 ~ 11102815 (+) | True | G94676 |
| TU127708 | lncRNA | upstream | 2652 | 11101328 ~ 11101569 (+) | True | G94674 |
| TU127628 | lncRNA | upstream | 107020 | 10996477 ~ 10997201 (+) | True | G94613 |
| TU127624 | lncRNA | upstream | 127156 | 10963548 ~ 10977065 (+) | True | G94609 |
| TU127618 | lncRNA | upstream | 155399 | 10948503 ~ 10948822 (+) | True | G94604 |
| TU127720 | lncRNA | downstream | 9876 | 11114398 ~ 11114677 (+) | True | G94680 |
| TU127721 | lncRNA | downstream | 11182 | 11115704 ~ 11116031 (+) | True | G94681 |
| TU127722 | lncRNA | downstream | 12377 | 11116899 ~ 11117140 (+) | True | G94682 |
| TU127723 | lncRNA | downstream | 12809 | 11117331 ~ 11117684 (+) | True | G94683 |
| TU127724 | lncRNA | downstream | 13756 | 11118278 ~ 11118503 (+) | True | G94684 |
| XM_039811575.1 | mRNA | upstream | 155905 | 10946932 ~ 10948316 (+) | True | si:ch211-162e15.3 |
| XM_039812278.1 | mRNA | upstream | 344292 | 10748929 ~ 10759929 (+) | True | LOC120566056 |
| XM_039812279.1 | mRNA | upstream | 370260 | 10722915 ~ 10733961 (+) | True | LOC120566058 |
| XM_039812280.1 | mRNA | upstream | 372916 | 10722902 ~ 10731305 (+) | False | LOC120566058 |
| XM_039812277.1 | mRNA | upstream | 389339 | 10696023 ~ 10714882 (+) | True | tm4sf18 |
| XM_039811350.1 | mRNA | downstream | 619 | 11105141 ~ 11107198 (+) | True | LOC120565506 |
| XM_039811528.1 | mRNA | downstream | 118000 | 11222522 ~ 11237901 (+) | True | ccdc17 |
| XM_039811329.1 | mRNA | downstream | 143912 | 11248434 ~ 11304093 (+) | True | LOC120565497 |
| XM_039812317.1 | mRNA | downstream | 207216 | 11311738 ~ 11356871 (+) | True | LOC120566075 |
| XM_039812048.1 | mRNA | downstream | 255168 | 11359690 ~ 11458146 (+) | True | LOC120565923 |
| TU127615 | other | upstream | 155975 | 10946976 ~ 10948246 (+) | False | si:ch211-162e15.3 |
| TU127611 | other | upstream | 162977 | 10916925 ~ 10941244 (+) | True | G94598 |
| TU127375 | other | upstream | 944414 | 10074206 ~ 10159807 (+) | False | LOC120565490 |
| TU127361 | other | upstream | 1155991 | 9947106 ~ 9948230 (+) | False | ttc14 |
| TU127346 | other | upstream | 1201032 | 9902285 ~ 9903189 (+) | True | G94376 |
| unassigned_transcript_388 | other | downstream | 144053 | 11248575 ~ 11248647 (+) | True | trnam-cau_8 |
| TU127781 | other | downstream | 324509 | 11429031 ~ 11444533 (+) | False | LOC120565923 |
| XR_005640174.1 | other | downstream | 1901054 | 13005576 ~ 13100445 (+) | True | raver2 |
| TU128204 | other | downstream | 2068503 | 13173025 ~ 13220372 (+) | True | G95046 |
| XR_005640172.1 | other | downstream | 2274876 | 13379398 ~ 13382744 (+) | True | LOC120564964 |
