RNA id: XM_039810529.1


Basic Information

Item Value
RNA id XM_039810529.1
length 5173
RNA type mRNA
GC content 0.55
exon number 27
gene id mast3b
representative True

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 16131146 ~ 16165817 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

AGCCGGAGGTAACGAGCAGCACTTGAACGCAGCATCAGGCTCCAGCTTGctcacacacggacacacaagcAGCCAGCAGCGTGTGTTTGGCCAAACTAAAGTGTGCTGCGGCTGTGTGAACGGTATTACACACGCGCCAAACAAACTGACATGGAGGTGATGTTTCTGGGACCGGACCGCGGTGAGAGAGCCGACCGGAGGATGTAACGGCAGCTCCAGGGCCGTTGGGACCGCACGAGGAAGACAGAATACAAAAGGAACCGCCGAGAAGAGGAGGCGATGGTgggaagagcagcagcagcagcagcagcagcagcagcagcagcgggagCGGGCTTCACATAGACCCGAGCTTCAGTTTTCTGAAATCATCATTAACTTTGAAACTGGGCTGTAAATGCAAGAAAGTCCTCCAGCATGTCGGATCCAAGTCACTGGTCTGCGGTGCCAAACCAGAACAAGTCCCAATTTGTTCCGGGAGCTTTGCTGAAGCGCTCTAAAAGCTGTCGCAGCAGCAACAGGAAGAGCCTCGGTGTCGGGACGCCGTCACCCACACTGTCCCGGCCGCTCTCCCCGCTCTCACTCCACACTGCTGCGAGCAGCCCTCTGGACAGCCCTCGAAATGTGTCAACCAGTACCTGCCTCAACTTTCCATTTGCCCGAAGTCACTTGGCTCGTGCCGACAGAGCTGAGGGCCGGAGATGGTCCCTGGCATCCCTCCCCTCGTCTGGCTATGGAACCAACCCGCCGAGCTCCACCGTCTCGtcctcctcatcctcccagGAGCGTCTTCACCAGCTTCCCTACCAGCCGACTCAAGATGAGCTGCACTTCCTCTTCAAACACTTCCGCAGCACAGACAGCATGACCGACGAGGATGGGCGGCCTTCAACGGTCATACGACCACGTTCTCGGAGCCTCAGCCCCGGGCGATCCAGCGTCTCCTTTGATAATGAGATTGTCATGATGAACCATGTTTACAGAGAACGTTTTCCAAAGGCCACAGCCCAGATGGAGGAGCGCTTGTTTGAGATTATCACCCACTGCTCTCCAGACAGCTCCCTCCCGTTGGCTGACGGGGTGCTGGGCTTCATCCAGCACCAGTTGGTCGAGCTGGTTAGAGACTGTCTGGACAAGTCCCAGACAGGCCTGGTTACCTCCCGCTACTTTGCTGAGCTGCAGGAGAAGCTAGAGAAGCTGCTTCACGAGGCATACGAGCGTTCTGAAAGCGAGGAGGTATCCGTCATCATCCAGCTGGTGAGGAAGATCCTCATCATAATCTCTCGGCCTGCTCGCCTCCTAGAGTGTCTGGAGTTTGACCCGGAAGAGTTTTATCACCTACTTGAGGCAGCAGAGGGTCACGCCAAAGTCGGGCAAGGAATCAAGACGGACATCCCGCGCTACATCATCAGCCAGCTGGGTCTGACACGGAACCCATTAGAAGACATGGTACAGCTTGAACAGTATGAGGCCAATGCTTCAGTGTCAGTGGAACCAGATGGTAATGTGGAGAGTAAAGCCCCACAGATGCTGACACCGACTCGAAGGAAACCTTTTGAGAGTGATTTTGATACTATCAAACTCATCAGTAATGGAGCTTATGGGGCCGTGTATCTGGTCCGTCACAAGGAGACCCGCCAACGGTTTGCCATGAAAAAGATAAATCGTCAGAACCTGGTCCTGAGGAACCAGATCCAGCAGGCTTTTGTGGAGCGAGACATCCTGACTTTTGCCGAGAACCCCTTTGTTGTCTCCATGTTCTGCTCTTTTGAGACACGACGTCACCTCTGCATGGTCATGGAGTACGTGGAagGTGGAGATTGTGCGAACTTGCTCAAGAACATGGGCCCACTGCCTGTAGAAATGACAAGGTTGTACTTTGCTGAAACAGTCCTGGCCCTGGAGTACCTTCACAACTATGGTATTGTGCATCGGGATCTGAAACCTGACAATTTGTTGATAACATCCATGGGCCACATCAAGCTGACAGACTTCGGCCTGTCTAAAATTGGCCTGATGAACATGACCACCAACCTGTACGAGGGTCACATGGAGAAAGACACAAGAGAGTTTATAGACAAACAGGTGTGTGGCACTCCAGAGTACATTGCCCCGGAGGTGATCCTCAGGCAGGGctatgggaagccagtggactGGTGGGCGATGGGGGTCATCCTATATGAATTCCTGGTCGGCTGTGTTCCGTTCTTTGGTGACACACCCGAAGAGCTTTTTGGACAAGTTGTCAGTGATGAAATCATTTGGCCAGAAGGAGACGATGCCTTACCTGTTGATGCCCAGGATCTGATCACCCGCTTGCTCAGACAGAGTCCTTTAGACCGACTAGGAACTGGCGGAGCCCCCGAGGTCAAACACCACCCCTTCTTCCTGGGTTTGGACTGGAATGGACTCCTGAGACAGAAAGCTGAATTCATCCCTCAGCTGGAGGCGGAGGACGACACCAGCTACTTTGACACTCGTTCAGAACGTTACCATCATTTGGCATCTGACGAGGATGAGGAAACTAATGATGAAGAGTCTTCCTTGGAAATCAGACAGTTTTCTTCCTGGTCGCATCGCTTTAGCAAGGTGTACAGCAGCACAGAACATCTGGCAACGCCGTCCAACCTCAGCTTCTCCTCCGACCGCAGCCACAGCGAGGACAAGGAGGACCGCGGGGACATGGGAGGACTCAGCTCCTCCCCGAGCCCAGCAGAGGGCAGACATGCCAGACGCATGGCCAGCCTTCGCCCTCGggcctcctccagctcctcccaGTCCGAGAGGAGCACCAGTCCTCTGGTGATGAGCAGCACCCACAGCCTGGAGACGATGCCCCGCTTTGCCCTCTCCACTGATGATGAAGCTGAGGTGGTTGTGTCAAACCTTCAGAGGATCAGGATTCGCAGCAACAGCACCGGGGCCAAACACTCGTCCCCCAACGATCTGGTCGGCCCTCGGCGCTTTGGTAACCAGCTGGAGACGCCGGACAGACAGAGGCTTCCCTGTGGAGGAAAGGTTCCCAAGTCGGCCTCTGTCTCAGCCCTGTCTCTCATCATCACTACAGACGACTCGCCCGGCGGCCTCCAGCCCAGTCCCATCTCCCCACGCTCTTTGTCCTCCAACCCTTCGTCCCGTGACTCCTCCCCCAACCGGGACCTTTCGCTCAGCCCCGGCAGCCTGAAGCCTCCCATTGTCATCCACACCTCGGGGAAGAAGTTTGGCTTCACCCTGCAGGCCATCCGGGTCTACATGGGCGACAGCGATGTCTACACGGTGCATCACATGGTGTCGAGTGTGGAGGAGGGTAGCCCGGCTCACCAGGCAGGTCTCTGCACTGGAGACCTCATCACCCACGTGAACGGAGAGTCTGTCCAAGGCCTGGTCCACCCTGAGATGATAGAACTGCTACTGAAGAGTGGCAGCAAGGTGACGCTTCAGACCATAGCGCTTGAGAACACGTCAATCAAAGTGGGTCCAGCTCGTAAGATCAAACACAAAGGCAAGATGGCTCGTCGCAGCAAGAAGAGCAAGAGGAGAGATAATTACGACAGGCGACGAAGCATCTTGAAGAAGCTGTCCAAGCAGACCACAGTGATGCACAGCAGTCGCAGCTTCAACTCAGGTCTCCACCACTCAGTTTCCTCCAGCGAGAGTCTCCCAGGCTCCCCGACCCACAGCCTCTCCCCCGGCCCCTCTACACCCTGCCGGAGCCCCGCACCCGACCATCAGGCCTTTGACAATAACTCTCCTCAGAGCACATCTCCTTGCTCCAGCTCTCCCAGTTCCCCCGCTGCACACATTCGGCCCAGCTCTCTCCACGGCCTGGGCTCCAAACTCAGCACACAGCGCTACACCAAGGTGGGCCGCCGGAAGTCAACCAGCAACATCCCCCCCTCGCCCCTGGCCTGcaactcctcctcatcctccaccCAACctctttctccacagcgctctCCCTCTCCAATGTCAGGCTTCGCCAAAACCCTTCACGCCTACCACGGCAAAGCCCTGTCCCCGCCCACCATCGTTAGACACATTGTCCGGCCCCGCAGCGCCGAGCCACCTCGATCTCCTCTCCTGAAGAGGGTACAGTCAGCTGAGAAGCTGTCTGGTGTGTATCATGCTGATAAGAAGTCGTACACCCCCCGCAGGCACACGCTGGAAGTACCGTTTTACTGTGAAGGGGACCTGCTGGGTGACTCGGAGGCAGAGGGTGCCTCTGGAGGCTCCCACTTTGGGGCCGATCTCAGCAGGCTAGGGGGATACATCGGCAGCCAGAGGCTGAGGGATTCTGGGATTGAACGCTCGGAGCAGCTGGTCGTGATGCGAAAGCTCAACCTATCCGAGCGGCGAGACTCCTTTAAGAAACAGGAGGCGGTGCAGGAGGTGAGCTTTGACGAGCCGGAGGAGAAAACCAGCACCCCAGTTACAGAGACCCCCACAGCTCCAGCAGCCCAAACACATCAGCAGCATCACAGGACGGCCTGGATGCTCACTCGACCCCAAACCAGCGTGGAGGTGGAGCCGGAAGTGCCGGTGGTGAGGAGGTTCACACTGGTGCCCCAGATCGCCGTACAGGGCTCAACGGAGAGCGAGCAGGATGAGTGGGAGCCGTGTTCAGATGGAGAGGAAACCAACGAGACACCCGAGCTGGAGGTGGGCATCACTTCATCTCAGCCACAACAGGCAGGACGTCCTCTTGGTGACACCAGCTGCAGCCAGGCAGCAGAAACCACCTCCACTGGTCCTCAGGTTGGACCATCTACAGAGAAGtctgagtgcagagagggaTCTCCACAAAAAGGGCATCTGAGAAAGTGACAACTCACCACTGCACTCATTTCAACTgctcatgtctttttttcttttaagtctTTGAAAGTTGCAAACGCATTTAAGAAACTTGTCTGGCTGAGAGAGAGTAGGAGAAGATTTTACTTGAATTTTCTAGACGTAAATATTTGCCTCAAGGCATTTCAGACATTGTGGtcttatttattacatttgtaAACTATGATGAGTTAGTAACGGGGGAAAGGGGGAAGTTTGAACAGCCAGGGCTCAACAGTTTTGTATCCatgaaatgtgtatttttttttttttgtcttttgactGGATTGTTTTTTGTATAAATgtctattttttaaataaattgtcGTAGTACAGAATA

Function

GO: NA

KEGG:

id description
K08789 MAST; microtubule-associated serine/threonine kinase

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU129381 lncRNA upstream 10173 16070354 ~ 16127940 (+) True G95929
TU129315 lncRNA upstream 156615 15980690 ~ 15981498 (+) True G95877
TU129314 lncRNA upstream 157487 15979752 ~ 15980626 (+) True G95876
TU129311 lncRNA upstream 163763 15973181 ~ 15974350 (+) True G95873
TU129289 lncRNA upstream 203533 15931028 ~ 15934580 (+) True G95853
TU129418 lncRNA downstream 385 16166202 ~ 16169844 (+) True G95952
TU129417 lncRNA downstream 461 16166278 ~ 16169844 (+) False G95952
TU129522 lncRNA downstream 124006 16289823 ~ 16290420 (+) False kcnn1b
TU129574 lncRNA downstream 337328 16503145 ~ 16503811 (+) True G96070
TU129581 lncRNA downstream 427059 16592876 ~ 16593182 (+) True G96075
XM_039812264.1 mRNA upstream 36562 16088746 ~ 16101551 (+) True il12rb1
XM_039810948.1 mRNA upstream 90192 16034712 ~ 16047921 (+) True LOC120565290
XM_039812387.1 mRNA upstream 106135 16022577 ~ 16031978 (+) True tmem38a
XM_039811038.1 mRNA upstream 143947 15990550 ~ 15994166 (+) True LOC120565334
XM_039810158.1 mRNA upstream 241691 15890054 ~ 15896422 (+) True LOC120564897
XM_039810532.1 mRNA downstream 4646 16170463 ~ 16173569 (+) True ndufa7
XM_039810533.1 mRNA downstream 9091 16174908 ~ 16204745 (+) True LOC120565120
XM_039810534.1 mRNA downstream 9092 16174909 ~ 16204745 (+) False LOC120565120
XM_039812467.1 mRNA downstream 43557 16209374 ~ 16213553 (+) True LOC120566178
XM_039810981.1 mRNA downstream 50479 16216296 ~ 16225461 (+) True LOC120565304
XR_005640328.1 other upstream 1221507 14810368 ~ 14916606 (+) False dennd1b
XR_005640329.1 other upstream 1224080 14810368 ~ 14914033 (+) False dennd1b
TU128764 other upstream 1516700 14619358 ~ 14621413 (+) True G95460
XR_005640172.1 other upstream 2755369 13379398 ~ 13382744 (+) True LOC120564964
TU128204 other upstream 2917741 13173025 ~ 13220372 (+) True G95046
XR_005640269.1 other downstream 154677 16320494 ~ 16341048 (+) False kdm4b
TU129832 other downstream 1689820 17855637 ~ 17859152 (+) False nppc
XR_005640350.1 other downstream 1700731 17866548 ~ 17866681 (+) True LOC120566215
XR_005640362.1 other downstream 1702849 17868666 ~ 17868802 (+) True LOC120566228
XR_005640363.1 other downstream 1705893 17871710 ~ 17871847 (+) True LOC120566229

Expression Profile