RNA id: XM_039811233.1


Basic Information

Item Value
RNA id XM_039811233.1
length 1544
RNA type mRNA
GC content 0.60
exon number 8
gene id serpinc1
representative False

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 1891554 ~ 1908999 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

ctgtttgtgtctgaaaACAGTTTGGATCCCAACAAGAGAACCAGAATAACTCAACAGAAGCAGAGACGTCTCTCCGTGCAGAATGAGGGCTCCTGATTGGCTGTTGGTTCTGGCGATCCTGCCGCTCGCCTCCCTGGCCGTCCCTCCTGACATCTGCAGCGCCAAACCCAAAGACCTGGGCCTGGAGCCGCGCTGCATCTACCGCAGCCCGGAGCCAGAGGGCCCCACGGTGGCCCCCCCCGAGGCCATCCCCGGCGCCACCAACCCCCGCGTGTGGGAGCTGTCCAAGGCCAACGGGCGCTTCGCCCTGGCGCTCTACAAACAGCTGGCGCTCAGTAAGACCCCCGACGCCAACATCTTCATGTCCCCCATCAGCATCTCCACCGCCTTCGCCATGACCAAACTGGGAGCCTGCAACCGCACGCTGCAGCAGATCATGCAGGTGTTTCAGTTCGACACCATCAAAGAGAAGACGTCCGATCAGGTCCACTTCTTCTTCGCCAAACTCAACTGCCGTCTGTACCGGAAGAAGGACGCGACCACGGCGCTGATCTCCGCCAACCGGCTGTTCGGAGACAAGTCTCTGGTCTTCAGCGAGACGTACCAGAACATCAGCGAGACGGTGTACGGAGCCAAGCTGCTGCCCCTCAACTTCAGGGAGAACCCGGATGCGGCCCGCGTCAGCATCAACAACTGGATCTCCAACAAGACGGAAAACCTGATCCAGGAAACGCTGCCGGTCGGATCGCTGGACTCCACCACGATGCTGGTCCTCGTCAACACCATCTACTTCAAGggccGGTGGAAGAACAAGTTTGACCCAGACCTGGTGTACCAGTCTGAGTTTGAGGTGAGCAGCGAGCGGCGCTGCCCGGTCCACATGATGTACCAGGAGACCCGCTTCAGGTACCGGTCCCTCCCCGAGGACCACGTCCAGCTGCTGGAGATGCCCTACCGCGGAGACCACATCACCATGGTGATCATCCTGCCCGCCAAAGACACCACGCTCGCCCAGgtggaggagagtctggacCTGAACAAACTGACCCGCTGGATGGATGAGATGAAGGAGACGACTGTCTCCGTCTCTGTCCCCCGGTTCAGGGTGGAGGACTCCTTCAGTCTGAAGGAGGAGCTGCAGAACATGGGCCTCACGGACCTGTTCAGCGCCGAGCACGCCAGCCTGCCAGggttGTTGGAGGACGGCAGTGACGTTCTGCACATCTCCGATGCTTTCCATAAAGCTTTCCTGGAGGTGAACGAGGAGGGCAGCGAGGCGGCAGCAGCCTCCGCCGTGGTAGCCGTGGGGCGTTCCCTGAACCTGTTCCGGGAGATCTTCCTCGCCGATCGGCCGTTCCTGCTGCTCATCAGAGAGTCCAGCATCAACGCCCTGCTGTTCACCGCCAGGGTGGCCAACCCCTGCAGCCAATAACATAACCGTGCAGGACTAATGTCCAGCATCAGGCagagtcactaaaagttctgttgttgctgctgacagactcacattatCATTCTAAGAGTctgacattatgggatggatc

Function

GO:

id name namespace
GO:0010951 negative regulation of endopeptidase activity biological_process
GO:2000266 regulation of blood coagulation, intrinsic pathway biological_process
GO:0042221 response to chemical biological_process
GO:0005615 extracellular space cellular_component
GO:0008201 heparin binding molecular_function
GO:0004867 serine-type endopeptidase inhibitor activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU124204 lncRNA upstream 17388 1874886 ~ 1876314 (+) False LOC120565570
TU124185 lncRNA upstream 62845 1804469 ~ 1830857 (+) True G92257
TU124174 lncRNA upstream 115872 1743775 ~ 1777830 (+) True G92248
TU124172 lncRNA upstream 140750 1733566 ~ 1752952 (+) True G92247
XR_005640239.1 lncRNA upstream 193200 1699420 ~ 1700502 (+) True LOC120565416
TU124117 lncRNA downstream 233 1909232 ~ 1910061 (+) False G92201
TU124121 lncRNA downstream 233 1909232 ~ 1910061 (+) False G92201
TU124211 lncRNA downstream 43987 1952986 ~ 1953927 (+) True G92274
TU124212 lncRNA downstream 50853 1959852 ~ 1960134 (+) True G92275
TU124213 lncRNA downstream 50853 1959852 ~ 1960134 (+) False G92275
XM_039811456.1 mRNA upstream 4615 1867721 ~ 1889087 (+) True LOC120565570
XM_039811455.1 mRNA upstream 256204 1635963 ~ 1637498 (+) True sid1
XM_039811454.1 mRNA upstream 263022 1625574 ~ 1630680 (+) True LOC120565565
XM_039811453.1 mRNA upstream 318925 1537999 ~ 1574777 (+) True LOC120565564
XM_039812460.1 mRNA upstream 512788 1322405 ~ 1380914 (+) True LOC120566171
XM_039811459.1 mRNA downstream 71839 1980838 ~ 1993868 (+) True LOC120565574
XM_039811460.1 mRNA downstream 85820 1994819 ~ 2024965 (+) False LOC120565575
XM_039811243.1 mRNA downstream 141963 2050962 ~ 2071903 (+) False dph5
XM_039811242.1 mRNA downstream 141965 2050964 ~ 2063004 (+) True dph5
XM_039811244.1 mRNA downstream 463055 2372054 ~ 2379851 (+) False reep6
TU124157 other upstream 89307 1696974 ~ 1804395 (+) True G92234
TU124103 other upstream 357846 1463815 ~ 1535856 (+) False LOC120565410
TU124067 other upstream 637508 1241387 ~ 1256194 (+) True G92169
TU124060 other upstream 668894 1220810 ~ 1224808 (+) False trmt13
TU124125 other downstream 79809 1988808 ~ 2025931 (+) True LOC120565575
TU124251 other downstream 163183 2072182 ~ 2076104 (+) True G92293
TU124333 other downstream 457121 2366120 ~ 2368316 (+) False G92333
TU124352 other downstream 462989 2371988 ~ 2380260 (+) False reep6
TU124353 other downstream 462989 2371988 ~ 2380260 (+) True reep6

Expression Profile