RNA id: unassigned_transcript_387


Basic Information

Item Value
RNA id unassigned_transcript_387
length 72
RNA type tRNA
GC content 0.60
exon number 1
gene id trnah-gug_12
representative True

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 9572298 ~ 9572369 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

GCCGTGATCGTATAGTGGTTAGTACTCTGCGTTGTGGCCGCAGCAACCCCGGTTCGAATCCGGGTCACGGCA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU127124 lncRNA upstream 20607 9547714 ~ 9551691 (+) True G94238
TU127114 lncRNA upstream 28804 9541467 ~ 9543494 (+) False LOC120566011
TU127116 lncRNA upstream 31239 9540537 ~ 9541059 (+) True G94231
XR_005640322.1 lncRNA upstream 76941 9494153 ~ 9495357 (+) False LOC120566016
TU127112 lncRNA upstream 76970 9493981 ~ 9495328 (+) True LOC120566016
TU127153 lncRNA downstream 89763 9662132 ~ 9672803 (+) False G94259
TU127155 lncRNA downstream 101062 9673431 ~ 9679737 (+) True G94259
TU127173 lncRNA downstream 119560 9691929 ~ 9693033 (+) True G94266
TU127336 lncRNA downstream 328826 9901195 ~ 9902122 (+) True G94373
XR_005640304.1 lncRNA downstream 336538 9908907 ~ 9912100 (+) True LOC120565916
XM_039812201.1 mRNA upstream 28763 9384509 ~ 9543535 (+) False LOC120566011
XM_039812218.1 mRNA downstream 2889 9575258 ~ 9587669 (+) False depdc1a
XM_039812217.1 mRNA downstream 3067 9575436 ~ 9587669 (+) True depdc1a
XM_039812221.1 mRNA downstream 16787 9589156 ~ 9603575 (+) True LOC120566020
XM_039812222.1 mRNA downstream 42426 9614795 ~ 9671788 (+) True fnbp1l
XM_039811520.1 mRNA downstream 193707 9766076 ~ 9785140 (+) True hps3
TU127128 other upstream 14730 9552296 ~ 9557568 (+) True G94239
TU127064 other upstream 412603 9147162 ~ 9159695 (+) True G94199
TU126920 other upstream 1317723 8237370 ~ 8254575 (+) True G94073
TU126919 other upstream 1326477 8237370 ~ 8245821 (+) False G94073
TU126885 other upstream 1667051 7898672 ~ 7905247 (+) False LOC120565614
TU127191 other downstream 245252 9817621 ~ 9879198 (+) True G94281
TU127195 other downstream 272380 9844749 ~ 9845804 (+) False LOC120565620
TU127196 other downstream 272380 9844749 ~ 9845981 (+) False LOC120565620
TU127346 other downstream 329916 9902285 ~ 9903189 (+) True G94376
TU127361 other downstream 374737 9947106 ~ 9948230 (+) False ttc14