Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU189568 |
| length | 473 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 2 |
| gene id | G140559 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053125.1 |
| NCBI id | CM020922.1 |
| chromosome length | 39125861 |
| location | 1834599 ~ 1882455 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| id | name | namespace |
|---|---|---|
| GO:0031497 | chromatin assembly | biological_process |
| GO:0006323 | DNA packaging | biological_process |
| GO:0006325 | chromatin organization | biological_process |
| GO:0006333 | chromatin assembly or disassembly | biological_process |
| GO:0006334 | nucleosome assembly | biological_process |
| GO:0071824 | protein-DNA complex subunit organization | biological_process |
| GO:0065004 | protein-DNA complex assembly | biological_process |
| GO:0034728 | nucleosome organization | biological_process |
| GO:0051276 | chromosome organization | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU189546 | lncRNA | downstream | 11152 | 1817057 ~ 1823447 (-) | False | G140548 |
| TU189548 | lncRNA | downstream | 11152 | 1817057 ~ 1823447 (-) | False | G140548 |
| TU189522 | lncRNA | downstream | 42937 | 1791040 ~ 1791662 (-) | True | G140536 |
| TU189521 | lncRNA | downstream | 43657 | 1790710 ~ 1790942 (-) | True | G140535 |
| TU189518 | lncRNA | downstream | 46510 | 1787304 ~ 1788089 (-) | False | G140534 |
| TU189582 | lncRNA | upstream | 10954 | 1893409 ~ 1893793 (-) | True | G140572 |
| TU189619 | lncRNA | upstream | 18572 | 1901027 ~ 1905267 (-) | True | G140597 |
| TU189620 | lncRNA | upstream | 18572 | 1901027 ~ 1905267 (-) | False | G140597 |
| TU189656 | lncRNA | upstream | 24790 | 1907245 ~ 1908644 (-) | True | G140601 |
| TU189625 | lncRNA | upstream | 44677 | 1927132 ~ 2030369 (-) | True | LOC120573528 |
| XM_039822828.1 | mRNA | downstream | 59681 | 1749519 ~ 1774918 (-) | False | aco1 |
| XM_039822829.1 | mRNA | downstream | 59707 | 1749519 ~ 1774892 (-) | True | aco1 |
| XM_039823278.1 | mRNA | downstream | 169654 | 1660137 ~ 1664945 (-) | True | LOC120573508 |
| XM_039823279.1 | mRNA | downstream | 173587 | 1660137 ~ 1661012 (-) | False | LOC120573508 |
| XM_039823148.1 | mRNA | downstream | 185167 | 1625891 ~ 1649432 (-) | False | tspan5a |
| XM_039823219.1 | mRNA | upstream | 1447 | 1883902 ~ 1885687 (-) | True | LOC120573473 |
| XM_039821465.1 | mRNA | upstream | 137157 | 2019612 ~ 2022367 (-) | True | LOC120572242 |
| XM_039823313.1 | mRNA | upstream | 140564 | 2023019 ~ 2032506 (-) | False | LOC120573528 |
| XM_039821762.1 | mRNA | upstream | 571612 | 2454067 ~ 2573483 (-) | False | camk2d1 |
| XM_039821757.1 | mRNA | upstream | 571612 | 2454067 ~ 2573483 (-) | True | camk2d1 |
| TU189195 | other | downstream | 1382929 | 443550 ~ 451670 (-) | True | G140274 |
| unassigned_transcript_680 | other | downstream | 1407115 | 427403 ~ 427484 (-) | True | trnal-aag_5 |
| unassigned_transcript_679 | other | downstream | 1415593 | 418935 ~ 419006 (-) | True | trnam-cau_42 |
| unassigned_transcript_678 | other | downstream | 1417518 | 417010 ~ 417081 (-) | True | trnam-cau_41 |
| unassigned_transcript_677 | other | downstream | 1418731 | 415797 ~ 415868 (-) | True | trnam-cau_40 |
| TU189682 | other | upstream | 169026 | 2051481 ~ 2058191 (-) | True | G140615 |
| TU190151 | other | upstream | 2272469 | 4154924 ~ 4155547 (-) | True | G141003 |
| TU190189 | other | upstream | 2392196 | 4274651 ~ 4275274 (-) | True | G141027 |
| TU190191 | other | upstream | 2392196 | 4274651 ~ 4275274 (-) | False | G141027 |
| TU190193 | other | upstream | 2392196 | 4274651 ~ 4275274 (-) | False | G141027 |
