RNA id: XM_039821280.1


Basic Information

Item Value
RNA id XM_039821280.1
length 3617
RNA type mRNA
GC content 0.49
exon number 2
gene id arsj
representative True

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 2597834 ~ 2622100 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

TCAGCGGTCCCGAACGGACCTGCCTCTTATAGACAGAGATATTAGACAGatatccatgtgtgtgtctccacgCCTCGGTGTGCTCTCAGCCCGGGAGGACCGCTGTGTGACAGGATGGAGGACATCTGCTGTCAGCTCAGTGCACCGGCTGCTTCACTGTCAGCTAGGACTCTGGGAGCTCTGCGCGTCTTTTGACAGAAACTACACCGTCGGGGGGGAATGCTAGACAAACCGTACGTGTTGTTTCATACACATGTAGTTTGGAGACTTGTGAAGGTTAGCAACATGCAGAGTGTGTTTTAAAACTCAAACACCAGCTGACCAGGAGGTGCTTTTGGTTTCCACGTGGATTAATCGACAGTTGTGGTCGcctctgacttttttttcttctttttcttccacaAACCGCGAAGCTGTCAGTGTCAGTGGAGAAACGAAGTTAACACGATGTACGCGAGCTGCTGTTCCCCCCCGAACATGTGCAACAAGTTaccgcgtgcgcacacacaccgGCCCACTGACCGACGTTAGCCGCGAACCGGAGGTCTCAATCTGGCTGAAACATGTTTATCTTGTGGGTGCCGGTTAGCTTATTCCTCAGCTTCATCATTTCTCAGACGTGGAGCGTTCAGATGTCGTGGGATAACTGGAACGCCGATTTGCGCAACCGAGGGAATGAGTTCGATAAGCCGAGCTCTCAGCCACACATCGTGTTCATCCTGGTGGATGATCAAGGCTTCCGGGATGTTGGGTACCACGGCTCCGAGATCAAAACCCCGACTCTGGACCGGCTGGCCGCGCAGGGAGTCAAACTGGAGAATTACTACGTGCAGCCGCTGTGCAGCCCGTCCCGGAGCCAGCTCATGACCGGCAGgtaTCAGATCCACACAGGCCTTCAGCACTCAATCATCCGAGCCACCCAGCCCAACTGTCTGCCCCTGGAAAATGTCACCCTGCCCCAGAAGCTCAAGCAAGCGGGCTACTCCACCCACATGGTGGGCAAGTGGCATCTGGGCTTCTACAAGCGTGGCTGTCTGCCCACGCAGCGTGGCTTTGACACTTTCTTCGGCTCTCTGCTAGGAAGCGGTGACTATTACAGTCACTATAAATGTGAAGGGCCTGGTATGTGTGGCTACGATTTGTACGAAGGGGAGGAGGCAGCTTGGGAACAGGACCGCGGCTTGTACTCGACCGTGATGTTCACTCGAAAAGCTATCAGCATCTTAGCCAATCACAACCCTCGCAGACAACCCTTGTTTCTTTACTTAGCCTATCAGGCGGTTCATTCCCCGCTGCAGGTCCCTGCCCGCTACCTCGAGCGCTACAAGGGCATTCCAAACTTGCATCGTCGTAAATATGCCGCCATGGTGTCCTGCCTGGACGAAGCTATCCACAACCTCACGTTGGCGCTAAAACGCTACGGTTATTATGATAACACAGTTATAGTGTACTCTTCAGATAACGGAGGCCAGCCCTTAGCAGGTGGAAGCAACTGGCCCTTGAGGGGGAGTAAAGCCACCTACTGGGAAGGGGGGATTCGGGCGGTAGGCTTTGTCCACAGTCCCCTGTTGGTGAACAAAGGGACAAAATGTCGATCTTTGGTCCACATCACTGACTGGTTCCCTACGCTGGTGACACTGGGTGAGGGGACTTTAGACGAAGATCTAAGTCTGGACGGGTACGACGTCTGGGAGGCTATCAGTGAAGGCCGTCCATCTCCTCGCCAGGACATTCTTCACAACATTGACCCAATCTACATCAAAGCCAAGAATGGTTCGTGGAAGGCCGGGTATGGCTTATGGAACACAGCGATCCGGGCTGCGCTCCGGGTGGGCCACTGGAAGCTTCTGACGGGTGTCCCAGGCTACAGCGACTGGGTGCCCCCGCAGACCTTCTCCAACCAGCGGCTAACCAATCGCTACCATAATGAGCGTGTCCGTTGGGACCGGGGGAATTCTATCTGGCTGTTCAACATCACAGCCGACCCTTATGAGAGAGTGGACCTGTCCCAGCGCTACCCTCACATAGTGAAGAAGATGCTAATAAGGCTAGCGCAGTACAACAAGACCGCAGTGCCTGTACGCTACCCGGCGAAAGACCTCCGCTCTAACCCTCAGTACAATGGGGGCGTGTGGGGACCCTGGTACaaagacgagagggaggagcaAGAGGAGGACGAGAGATACAATAACTTGTTCACCAACCATCTTGGAAAAAGAAGGTGgaaaaagaaatcaaagaacagaaagttgaaaaggaAGGTAGAAGAGTAGCCTACCCCATTTGTGAAAGACTTTAACTGCCTTTTCTCAGGGATTGACACTTCCTGTTTCAGGATTGTCCTCTTCAGACATTCTATCTCCAGTTAGTTTCAACTTGACtccactatatactgtatgaaaaACAATGTGGATGGACCTTTTGAAATGCCTCAAAGGAATAAGAAAAAGATCCTCTCATTCAAACACTGTTGTCATGCATAGACACAACTAAGACCTCATGTTAACGTTAGGGGcatttaaacgtacaatatgtaactttctgccgctaggggtctctcaaccaaaacaatggattgtacacacagacttttgatgatgttgggaagttgcgtggaattatgggagttgtagttttttattgtttaacacCATCGCTGGTTAGAAtgcattcaagtttattcacgttacgtttagtaacgtttatttatgtaattctaataaaatagctgcatttcccccaacataattacgtatTTCTTTATTCGATCTGTAttggtagctgaccagttagctagtgagccagcaagctaacattagctagcagctaaaacaacaatatatatcacaatatatttcacaatttcaccttttggatggtttcaacaccgggcggacagggtttgttgtaacgctagctagctactcaacgaggctgagagacaggtGTTGCTTTTGTCGGGTTGATTTagctaactgtaaagacagctaaacgcgaaggggggagaaattcggcagcgAGGAGATTTTCGGCACGAACACCAGTAGCGCTAACGGAGACGTAGCTAACATTATTAGCTTAACTAGCTATTGCTACATGTCctggggctgttgtcagctctcATCCCGGATGAAGTCTCTTTGCGCcaggggagtgaggcagacagaccggggtgtgctagctggctaaattagcattagcttAGTCGTCTATCtataggctaacgttaacgttactggtGAACTCATTCGAGGGTTAGCCCAGTGCTGCTTTTATCCGTGGTCAAAACAATCCTACTACTAATAACTTTATGAGCGTATTGAACGAGGTTGTAACCCTATAATGTTATCCGccaagcattagcattaacgttagctacttgtcaaccagcacattgtagtaacgttaagctggaTCGATATTGCTATTTATCAATAAATAAGatctctgctgtattactgtgttgcaaagtggcatgtaattgatcacaaaatgatgccttGTGGCAGAAAAAGTAGTATTACGGTTAggagtatttttttctgtgacattgtatgatttacaattactatTACGGAGGGTGagaggttatatgacgccactgacaggcgactaaa

Function

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0008484 sulfuric ester hydrolase activity molecular_function

KEGG:

id description
K12375 ARSI_J; arylsulfatase I/J

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU189780 lncRNA downstream 140167 2454066 ~ 2458179 (-) False camk2d1
TU189788 lncRNA downstream 153750 2427912 ~ 2444596 (-) False G140710
TU189789 lncRNA downstream 153750 2442768 ~ 2444596 (-) True G140710
TU189768 lncRNA downstream 304511 2293629 ~ 2293835 (-) True G140696
TU189767 lncRNA downstream 319132 2278930 ~ 2279214 (-) True G140695
TU189826 lncRNA upstream 51423 2673523 ~ 2676919 (-) True G140747
TU189828 lncRNA upstream 66654 2688754 ~ 2690247 (-) True G140749
TU189829 lncRNA upstream 68217 2690317 ~ 2691045 (-) True G140750
TU189832 lncRNA upstream 107181 2729281 ~ 2729619 (-) True G140753
TU189844 lncRNA upstream 200770 2822870 ~ 2824231 (-) True G140761
XM_039821762.1 mRNA downstream 24863 2454067 ~ 2573483 (-) False camk2d1
XM_039821757.1 mRNA downstream 24863 2454067 ~ 2573483 (-) True camk2d1
XM_039821763.1 mRNA downstream 24863 2454067 ~ 2573483 (-) False camk2d1
XM_039821760.1 mRNA downstream 24863 2454067 ~ 2573483 (-) False camk2d1
XM_039821759.1 mRNA downstream 24863 2454067 ~ 2573483 (-) False camk2d1
XM_039822910.1 mRNA upstream 56845 2678945 ~ 2797531 (-) False pde5ab
XM_039822909.1 mRNA upstream 56845 2678945 ~ 2769605 (-) False pde5ab
XM_039822908.1 mRNA upstream 56845 2678945 ~ 2769604 (-) True pde5ab
XM_039822857.1 mRNA upstream 190455 2812555 ~ 2818659 (-) True si:dkey-219e21.4
XM_039823055.1 mRNA upstream 495134 3117234 ~ 3128616 (-) True c14h4orf54
TU189682 other downstream 540155 2051481 ~ 2058191 (-) True G140615
TU189195 other downstream 2146676 443550 ~ 451670 (-) True G140274
unassigned_transcript_680 other downstream 2170862 427403 ~ 427484 (-) True trnal-aag_5
unassigned_transcript_679 other downstream 2179340 418935 ~ 419006 (-) True trnam-cau_42
unassigned_transcript_678 other downstream 2181265 417010 ~ 417081 (-) True trnam-cau_41
TU190151 other upstream 1532824 4154924 ~ 4155547 (-) True G141003
TU190189 other upstream 1652551 4274651 ~ 4275274 (-) True G141027
TU190191 other upstream 1652551 4274651 ~ 4275274 (-) False G141027
TU190193 other upstream 1652551 4274651 ~ 4275274 (-) False G141027
TU190197 other upstream 1652551 4274651 ~ 4275274 (-) False G141027

Expression Profile