RNA id: TU190366


Basic Information

Item Value
RNA id TU190366
length 1617
RNA type TUCP
GC content 0.46
exon number 2
gene id G141145
representative True

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 4641495 ~ 4664198 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

ttttttttatattttaatgGCTACTGTGATGCCTAGCCAAGGTGGAGACGGTATACAGGGTTAATAATCAACCAAACTATCAAGTGAGCACAAAACTAATTTGACAGTAAAGTCAGGATCAATAAGTCGTAAATCAGGATTCAGTTGAGGCTGTACAACCACCTGGTTGGCGACAATTTAGGGTTAACACCACGCGTGTGGCTGTTCCCGTATTAACTTCAACAATTTTGATGACAGATTATACATTTAAGTCATAGTGAACTGAATATCTGGGTTTTGGGACTAACGGTGGGTTGAAACCAGCGATTCGAAGATGCCCCCTTGGGCTTTGGAGAATCGTGATaagcattatttttattaatatatatattaaaaagatCATCAGCAGATTCATTTATGAAGACCATAATGGTTAGTtgctacatacatacatagaagGCGGCGTCTAACAGGGTGGCACTTCGGATTTTGTATGAGTGATAAAACAATGACTACACTCCATTGCCCCTTTGTCTACACTTTTATTCTGTCGCTACACTCTCAACAGTGACTTTCGCAGTACTCAAGTTGTTTTGTGCTCACTCAGTATTTTTGACACCGAGGGACTGAGGTACAGATGTGAAAGAACCTCTAGGGAAGGACTTGAGCGGTCAGGATGTGTCCACACTGGAACCGGCCTGTGTTGGCTCCTGGCTGATGATCTGAGAAGTTGCCAAGGTACAGGCTCAGTCAAACGGCGGCAAACGCTGTTCAGTTTACAGTGACTGAGTGCAGCGCTGTCAACATGTCTCCCTAAACTTTTACCAGTGAACATGAGCGCAGTCagtactagccagtcagagttttccctgCTGAAATGGAGGGCGAGTAAAATGTTCTAATCAAATTAGTCCTGCGGCCAGCTACAGCTGTCCCAAACAGTTTCCCATTTCCACCTCCCATTCTCCTCACACACTGTGGGTGTTACCCCTTACATGgtgcatatatttacacaaagATAGAGACGTGGAGGAAAAACAAAGTGTGCTTTATCACCGTTGTTTCAGGATGAGAAATATCTTGATTtaaattacacatttaaaaacaggcGGCATTGAAAAGGGGAGCAAAAATAATTCAAGATCTGGAATAAAATACTACAAAGCCCAATGCATTGTGTCGTGTGAGTGTCGGTGTGTTGATGTGTGAGGGAAATGTACAGTcatctaagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgatggacaCATCAACTTGGGGAAGTAACAGAGGATTAAAGAAAAATGACACTGAaaagagggaaaataaaagactACTGGTATGGCGTACTGTGCTGCCTCTGTTAAGTGACGGCCTGAGCACAGACCCTCCCCGACTCCCACCCCACCCCCATGTCCTGTTAAAGACCCCCGTCCCTCCCCCTTCAGTCCTCCAGGACGATGGGTTCGCTGGTGCTGGAGGGGAGCAGGGGCATGGCCAGGGAGCGGGGGGGCGGTGGCGGCAGTTTGATCCGGACCAGGAGATGAGGTTTCCTGGCTGCCCGACGCATCTCCGACTGGGTCAGATGTTTCCTCA

Function

GO:

id name namespace
GO:0051082 unfolded protein binding molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU190340 lncRNA downstream 115301 4514007 ~ 4526194 (-) True G141123
TU190332 lncRNA downstream 151991 4489300 ~ 4489504 (-) True G141117
TU190330 lncRNA downstream 155029 4485903 ~ 4486466 (-) True G141115
TU190329 lncRNA downstream 156713 4483738 ~ 4484782 (-) True G141114
TU190317 lncRNA downstream 159449 4478430 ~ 4482046 (-) True G141109
TU190441 lncRNA upstream 63900 4728098 ~ 4730999 (-) True G141193
TU190453 lncRNA upstream 106774 4770972 ~ 4772477 (-) True G141202
TU190429 lncRNA upstream 109430 4773628 ~ 4829146 (-) False peli3
TU190430 lncRNA upstream 118815 4783013 ~ 4804388 (-) True peli3
TU190458 lncRNA upstream 170252 4834450 ~ 4834895 (-) True G141207
XM_039823547.1 mRNA downstream 113483 4518376 ~ 4528012 (-) True ecsit
XM_039823549.1 mRNA downstream 113491 4518376 ~ 4528004 (-) False ecsit
XM_039823548.1 mRNA downstream 113501 4518376 ~ 4527994 (-) False ecsit
XM_039822102.1 mRNA downstream 143288 4486570 ~ 4498207 (-) True si:dkey-106g10.7
XM_039822103.1 mRNA downstream 143289 4486570 ~ 4498206 (-) False si:dkey-106g10.7
XM_039821487.1 mRNA upstream 129280 4793478 ~ 4829162 (-) False peli3
XM_039821486.1 mRNA upstream 129280 4793478 ~ 4829162 (-) False peli3
XM_039821482.1 mRNA upstream 129280 4793478 ~ 4829162 (-) False peli3
XM_039821485.1 mRNA upstream 129280 4793478 ~ 4829162 (-) False peli3
XM_039821484.1 mRNA upstream 129280 4793478 ~ 4829162 (-) False peli3
TU190189 other downstream 366221 4274651 ~ 4275274 (-) True G141027
TU190191 other downstream 366221 4274651 ~ 4275274 (-) False G141027
TU190193 other downstream 366221 4274651 ~ 4275274 (-) False G141027
TU190197 other downstream 366221 4274651 ~ 4275274 (-) False G141027
TU190151 other downstream 485948 4154924 ~ 4155547 (-) True G141003
TU190477 other upstream 294481 4958679 ~ 4960005 (-) True G141219
TU190492 other upstream 435507 5099705 ~ 5100082 (-) True G141234
TU190708 other upstream 932760 5596958 ~ 5600462 (-) True G141400
TU190759 other upstream 1079361 5743559 ~ 5843146 (-) False G141439
TU190760 other upstream 1079361 5743559 ~ 5843146 (-) False G141439

Expression Profile