RNA id: TU190492


Basic Information

Item Value
RNA id TU190492
length 378
RNA type TUCP
GC content 0.55
exon number 1
gene id G141234
representative True

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 5099705 ~ 5100082 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

ataaaagcctgacacaacacgttaactttgacagaaacagttgagtttggtagctccatcagtaaggatgagacagagagagatccagctgcagtcaggtgacagagagagtgatgcgggaggggcctgctgccccgcaacggagggacagagtcaggctacccgtgacagagaagagagagagatagagagagagagatgcgggggggctcgctgccctgtcggagagtctgagcaggatggatcagagactgattacacacttaatttcagtgagagatgtgaggagaggaagagcaagggaaaaggagagatctggccgcgagggggggggcccatctaagatctcgtcccgggcccaggcaagactgtcagctg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU190491 lncRNA downstream 21489 5077628 ~ 5078216 (-) True G141233
TU190482 lncRNA downstream 63508 5035502 ~ 5036197 (-) True G141224
TU190480 lncRNA downstream 76620 5022593 ~ 5023085 (-) True G141222
TU190465 lncRNA downstream 151726 4944049 ~ 4947979 (-) True G141214
TU190466 lncRNA downstream 151726 4945419 ~ 4947979 (-) False G141214
TU190523 lncRNA upstream 108155 5208237 ~ 5208460 (-) True G141259
TU190665 lncRNA upstream 352210 5452292 ~ 5475138 (-) False nat16
TU190676 lncRNA upstream 459949 5560031 ~ 5564384 (-) False cd99l2
TU190699 lncRNA upstream 484080 5584162 ~ 5584526 (-) True G141394
TU190724 lncRNA upstream 611352 5711434 ~ 5711716 (-) True G141416
XM_039823408.1 mRNA downstream 15314 5038118 ~ 5084391 (-) False sstr1b
XM_039823407.1 mRNA downstream 15314 5038118 ~ 5084391 (-) True sstr1b
XM_039821481.1 mRNA downstream 270543 4793478 ~ 4829162 (-) False peli3
XM_039822976.1 mRNA upstream 14912 5114994 ~ 5119327 (-) True znf16l
XM_039822974.1 mRNA upstream 113056 5213138 ~ 5244957 (-) True LOC120573313
XM_039822981.1 mRNA upstream 219715 5319797 ~ 5335717 (-) False LOC120573316
XM_039822979.1 mRNA upstream 219715 5319797 ~ 5335711 (-) False LOC120573316
XM_039822978.1 mRNA upstream 219715 5319797 ~ 5335711 (-) False LOC120573316
TU190477 other downstream 139700 4958679 ~ 4960005 (-) True G141219
TU190366 other downstream 435507 4641495 ~ 4664198 (-) True G141145
TU190380 other downstream 438594 4660621 ~ 4661111 (-) True G141159
TU190189 other downstream 824431 4274651 ~ 4275274 (-) True G141027
TU190708 other upstream 496876 5596958 ~ 5600462 (-) True G141400
TU190759 other upstream 643477 5743559 ~ 5843146 (-) False G141439
TU190760 other upstream 643477 5743559 ~ 5843146 (-) False G141439
TU190761 other upstream 643477 5743559 ~ 5782623 (-) False G141439
TU190756 other upstream 677701 5777783 ~ 5843146 (-) True G141439

Expression Profile