RNA id: TU190665


Basic Information

Item Value
RNA id TU190665
length 473
lncRNA type sense_over
GC content 0.46
exon number 2
gene id nat16
representative False

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 5424561 ~ 5475155 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

GTGTCGAGTCTTCAGTGTATCACCGAGCTAGCCGGGTTCCCTGTCTTTCATTCATCACCGGAACTGTGCAGCTCGTGCATCATCCGTGATACCGTCGTCTCGTCTTGCCATCCCGTCTCCTCCGACCACCGACACCAAGGACACCTCGGCCGGCCATCACCCGCGGAAAAACACCCCTTCTCCATATCCTGGGCCCCTGGTAGGTCCGTTACCAGCCAAAGGCACAGAAGAATGGACCCAGGGAACATTGCATTACGAGCAGAAGAACTGTGAATGAGAATTCAAACATTGTACATAAACGAGCAATACAATGctcttaaaaattaaaaaaaatttaaacactaaatgttttttgggctattttatttgttattctGTTCAATCAGTTCAAATCAATCATTTTGGAAAGATTTCGACCAAACATTGCTATCATCGCCTGGGCAGTGTGGGGATGTGCATGTATTATACGCTTC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU190523 lncRNA downstream 243832 5208237 ~ 5208460 (-) True G141259
TU190491 lncRNA downstream 374076 5077628 ~ 5078216 (-) True G141233
TU190482 lncRNA downstream 416095 5035502 ~ 5036197 (-) True G141224
TU190480 lncRNA downstream 429207 5022593 ~ 5023085 (-) True G141222
TU190465 lncRNA downstream 504313 4944049 ~ 4947979 (-) True G141214
TU190676 lncRNA upstream 84893 5560031 ~ 5564384 (-) False cd99l2
TU190699 lncRNA upstream 109024 5584162 ~ 5584526 (-) True G141394
TU190724 lncRNA upstream 236296 5711434 ~ 5711716 (-) True G141416
TU190757 lncRNA upstream 302645 5777783 ~ 5829468 (-) False G141439
TU190758 lncRNA upstream 302645 5777783 ~ 5829468 (-) False G141439
XM_039821607.1 mRNA downstream 29190 5418473 ~ 5423102 (-) False LOC120572332
XM_039821606.1 mRNA downstream 30667 5418473 ~ 5421625 (-) True LOC120572332
XM_039822981.1 mRNA downstream 116575 5319797 ~ 5335717 (-) False LOC120573316
XM_039822979.1 mRNA downstream 116581 5319797 ~ 5335711 (-) False LOC120573316
XM_039822978.1 mRNA downstream 116581 5319797 ~ 5335711 (-) False LOC120573316
XM_039823376.1 mRNA upstream 84888 5560026 ~ 5582995 (-) True cd99l2
XM_039823379.1 mRNA upstream 141539 5616677 ~ 5620265 (-) True med11
XM_039823383.1 mRNA upstream 203078 5678216 ~ 5684645 (-) True rnaseka
XM_039823382.1 mRNA upstream 204688 5679826 ~ 5684661 (-) False rnaseka
XM_039823385.1 mRNA upstream 252498 5727636 ~ 5735182 (-) True si:dkey-6n21.13
TU190492 other downstream 352210 5099705 ~ 5100082 (-) True G141234
TU190477 other downstream 492287 4958679 ~ 4960005 (-) True G141219
TU190366 other downstream 788094 4641495 ~ 4664198 (-) True G141145
TU190380 other downstream 791181 4660621 ~ 4661111 (-) True G141159
TU190197 other downstream 1177018 4274651 ~ 4275274 (-) False G141027
TU190708 other upstream 121820 5596958 ~ 5600462 (-) True G141400
TU190759 other upstream 268421 5743559 ~ 5843146 (-) False G141439
TU190760 other upstream 268421 5743559 ~ 5843146 (-) False G141439
TU190761 other upstream 268421 5743559 ~ 5782623 (-) False G141439
TU190756 other upstream 302645 5777783 ~ 5843146 (-) True G141439

Expression Profile