RNA id: TU191532



Basic Information


Item Value
RNA id TU191532
length 244
lncRNA type inter_gene
GC content 0.42
exon number 2
gene id G141996
representative True

Chromosome Information


Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 8228180 ~ 8250562 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


AGAATGTGGGCTCTGATGATCTGAACTCTGCAGCTCTGAGGTTCCTTCCAAACACAATAAGGAACAGGAGGCCTGATCAGAGAGAGAAGTGGAGACTCAGGTTCTTTATAGCGCCAGCAGATAGACACAAGCAGCAATAGGACTGCAACTCTCAGTGGAACTGATGCTCTATATTCATCTGCTGCCAGAGTCAATggcaacattcttttattaaataaagttcCTATACTCATGaaaaaaaaaa

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU191528 lncRNA downstream 66 8227721 ~ 8228114 (-) True G141995
XR_005641441.1 lncRNA downstream 5999 8221839 ~ 8222181 (-) True LOC120572408
TU191500 lncRNA downstream 146525 8080864 ~ 8081655 (-) True G141974
TU191454 lncRNA downstream 218321 8006593 ~ 8009859 (-) True G141932
TU191453 lncRNA downstream 221123 8005828 ~ 8007057 (-) False G141932
XR_005641437.1 lncRNA upstream 6970 8257532 ~ 8258820 (-) True LOC120572405
XR_005641434.1 lncRNA upstream 46400 8296962 ~ 8298057 (-) True LOC120572402
TU191648 lncRNA upstream 83947 8334509 ~ 8335009 (-) False LOC120573543
TU191649 lncRNA upstream 96979 8347541 ~ 8347932 (-) True G142072
TU191630 lncRNA upstream 202330 8452892 ~ 8496522 (-) True LOC120572406
XM_039821698.1 mRNA downstream 9797 8216609 ~ 8218383 (-) True LOC120572396
XM_039823330.1 mRNA downstream 45086 8181627 ~ 8183094 (-) True LOC120573540
XM_039821646.1 mRNA downstream 50744 8173495 ~ 8177436 (-) True LOC120572365
XM_039821678.1 mRNA downstream 71929 8153141 ~ 8156251 (-) True LOC120572380
XM_039821651.1 mRNA downstream 82068 8144353 ~ 8146112 (-) True LOC120572368
XM_039821681.1 mRNA upstream 12503 8263065 ~ 8266610 (-) True LOC120572383
XM_039821684.1 mRNA upstream 79480 8330042 ~ 8332322 (-) True LOC120572386
XM_039823333.1 mRNA upstream 81803 8332365 ~ 8335374 (-) True LOC120573543
XM_039821673.1 mRNA upstream 87065 8337627 ~ 8340718 (-) True LOC120572375
XM_039821667.1 mRNA upstream 254489 8505051 ~ 8507235 (-) False LOC120572372
XR_005641432.1 other downstream 115496 8107647 ~ 8112684 (-) True LOC120572400
XR_005641433.1 other downstream 116260 8107647 ~ 8111920 (-) False LOC120572400
TU191428 other downstream 242230 7982937 ~ 7985950 (-) True G141913
unassigned_transcript_685 other downstream 390886 7837221 ~ 7837294 (-) True trnar-ucu_15
TU191399 other downstream 440585 7781944 ~ 7787595 (-) False fcer1g
TU191654 other upstream 214520 8465082 ~ 8465612 (-) True G142077
TU191658 other upstream 266461 8517023 ~ 8541543 (-) False LOC120572366
TU191660 other upstream 266461 8517023 ~ 8541543 (-) False LOC120572366
TU191762 other upstream 782385 9032947 ~ 9094204 (-) True LOC120572236
XR_005641406.1 other upstream 790403 9040965 ~ 9094193 (-) False LOC120572236

Expression Profile