RNA id: TU191654



Basic Information


Item Value
RNA id TU191654
length 350
RNA type TUCP
GC content 0.46
exon number 3
gene id G142077
representative True

Chromosome Information


Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 8465082 ~ 8465612 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


ctgaagtacccgttgagctgcatcacagctgcactatgtgcatggacctgtgccagtcagcacatcactcacctgtgtgcagaggacaggcagcagtagcacaaaccaagaagggtgcacaaccaggcctgggagagaaaattactgatgtccacaaaaccaaatcagagaaggagcatactatacaaagacaacagtggagagttcctggatcggtctgtcctcaaagtgccagagatctacaaggacttcacccttttctgcaccatcagcatataatcaaagtgataaaagagagaacaaattattgttttctctgttgacatgaataggtgcctgtaatgtctgtc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_005641444.1 lncRNA downstream 6775 8457772 ~ 8458307 (-) True LOC120572411
TU191649 lncRNA downstream 117150 8347541 ~ 8347932 (-) True G142072
TU191648 lncRNA downstream 130073 8334509 ~ 8335009 (-) False LOC120573543
XR_005641434.1 lncRNA downstream 167025 8296962 ~ 8298057 (-) True LOC120572402
XR_005641437.1 lncRNA downstream 206262 8257532 ~ 8258820 (-) True LOC120572405
TU191634 lncRNA upstream 10219 8475831 ~ 8496522 (-) False LOC120572406
XR_005641439.1 lncRNA upstream 10460 8476072 ~ 8496507 (-) False LOC120572406
XR_005641438.1 lncRNA upstream 10460 8476072 ~ 8496507 (-) False LOC120572406
TU191643 lncRNA upstream 24282 8489894 ~ 8496522 (-) False LOC120572406
TU191657 lncRNA upstream 44800 8510412 ~ 8523919 (-) False LOC120572370
XM_039821673.1 mRNA downstream 124364 8337627 ~ 8340718 (-) True LOC120572375
XM_039823333.1 mRNA downstream 129708 8332365 ~ 8335374 (-) True LOC120573543
XM_039821684.1 mRNA downstream 132760 8330042 ~ 8332322 (-) True LOC120572386
XM_039821681.1 mRNA downstream 198472 8263065 ~ 8266610 (-) True LOC120572383
XM_039821698.1 mRNA downstream 246699 8216609 ~ 8218383 (-) True LOC120572396
XM_039821667.1 mRNA upstream 39439 8505051 ~ 8507235 (-) False LOC120572372
XM_039821666.1 mRNA upstream 39439 8505051 ~ 8507235 (-) True LOC120572372
XM_039821668.1 mRNA upstream 39439 8505051 ~ 8507234 (-) False LOC120572372
XM_039821664.1 mRNA upstream 44781 8510393 ~ 8513147 (-) False LOC120572370
XM_039821663.1 mRNA upstream 44781 8510393 ~ 8513147 (-) False LOC120572370
XR_005641432.1 other downstream 352398 8107647 ~ 8112684 (-) True LOC120572400
XR_005641433.1 other downstream 353162 8107647 ~ 8111920 (-) False LOC120572400
TU191428 other downstream 479132 7982937 ~ 7985950 (-) True G141913
unassigned_transcript_685 other downstream 627788 7837221 ~ 7837294 (-) True trnar-ucu_15
TU191399 other downstream 677487 7781944 ~ 7787595 (-) False fcer1g
TU191658 other upstream 51411 8517023 ~ 8541543 (-) False LOC120572366
TU191660 other upstream 51411 8517023 ~ 8541543 (-) False LOC120572366
TU191762 other upstream 567335 9032947 ~ 9094204 (-) True LOC120572236
XR_005641406.1 other upstream 575353 9040965 ~ 9094193 (-) False LOC120572236
TU191765 other upstream 633129 9098741 ~ 9100414 (-) True G142173

Expression Profile