RNA id: XM_039822508.1


Basic Information

Item Value
RNA id XM_039822508.1
length 3748
RNA type mRNA
GC content 0.53
exon number 23
gene id adam19a
representative True

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 3803986 ~ 4118384 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

TTGACTCACGGaggagtcagagggaggcagagttGAACACGGCGAGGAAAGGGAGGACGGTCGGCGGTACCGAGGGTCACAGGGATGTACAGTAAACACAGGCAGAAAAATGCCCAAATATCACCGGCAAAATGTGGACGTTTGCtcgtttttctttcatttctatTGCTGAACGGCACACTGGACAGAGCCAGCGGAAACACCGGAgaacaagGGCTGCGGGGGGGAAGGACAGTGGCGGCGCAGTGGCTCTCTCAAAGCCGAAGCAAGAGGGAGGCCGGAACCTCAACACAGGAAGAATACCCAGTCAGAGGGGAAATAGCACTCTCATCCAATGACCTCCAACTGGTGCTACAAGTGGAACGTAATTATGAGCTTTTAGGCCCAGACTTTACAGAGACCTACTACACAGATGATGGACAGCCAGTGACTGTGCCCACTGACAATTACACTgacCACTGCTTCTACCATGGCCATGTGAGAGGACATCCAGATTCCTGGGTAGCTCTCAGCACTTGCTCAGGAGTCAGGGGCCTGATATCCTTGAATTCTAGTGACACATACTACCTGGAGCCAATCAATGGTGTGGATCCTCCCCACCATTCACTGTGGAGTGCAGAGGAACTGCCAATTAAAGGTGGAAACTGTGGACACGGCCAGCACACCACACAGTCCAACCACATCTCCAACCTGCTCAGACAGTTTAATTCAAGGGTTAAAAGAAACGCCTGGGGTACAACCAAGTACATGGAGCTGTACATAGTGGCTGACAACACACTGTTTAAACGGCAGAATAAGGACTATGGAAAGACCAAGGCGAGGATAATGGAAATTGCCAATTATGTGGATAAGtttTACAGGGCTCTGAACATTCGTGTGCCTCTGATTGGTCTGGAAGTTTGGACCGACAGGGATCAATGTATCGTCACTGAGGAGCCAAACGCCACCCTCTGGTCCTTCCTCCAGTGGAGACAGAAGCTGAAATCCCGCAAGAAACATGACAACGCCCAGCTGCTGACCGGTGTGATTTTCAAGGGGACAACTATCGGGATGGCACCGCTGGAGGGAATGTGCAGCCTGGAAAACTCTGGAGGCATCAACGTGGACCATTCAGAGGTGTCCATCGGCGCTGCGGCCACCATGGCCCACGAGATCGGCCACAACTTCGGCATGAGTCACGACCATGACGGCTGCTGTGTGGAGGCTACCGCTGAGCAGGGAGGCTGTGTGATGGCTGCCGCTACTGGGCATCCATTCCCACGCGTCTTCAGTCGCTGCAGCAAACGGGACCTGGACAGCTACTTTCAGAAGGGAGGGGGCATGTGTCTCTTTAACATGCCCAACATGAAAGACCTGGTGGGGGGCAAAAAGTGCGGAAACGGCTTTGTGGAGGATGGAGAACAGTGTGATTGTGGAGAACCTGATGAATGCACCAATGATTGCTGCAATGCCAATAATTGCACCTTGAAGGAGGAGGCTCAGTGTGCCCATGGAGTGTGCTGCGAGGGCTGCAAATTGAAGCAGGCAGGTACCATGTGCCGGGGGCCAGCGGGGGCGTGTGACCTGCCAGAGTACTGCACCGGGGCCTCTCCTTACTGTCCTGCCAACGTCTACCTGCTGGACGGCTCCTCCTGTCAGTACGGAGTGGCCTACTGCTACAACGGCATGTGCCTCACACACGAACAGCAATGCCTGCAGCTCTGGGGCTATGGAGCCCGACCAGCCCATGATGCCTGCTTTGAAGATGTCAATGCAGCAGGGAATGCTTTTGGGAATTGTGGGAAAGATGAACATGGCAACTACATGAAGTGTGAGAAAAGTGATGCCAAGTGTGGTAAGATCCAGTGCCACAGTGCTGCCAAGAAGCCCAAAGGCACCAACGCCGTCTCCATCGACACCACCATCAAGACGGATGGCATTGAGGTGAAGTGCCGAGGCACCTACGTCTACAGCACCCAGGACGGCCAGGGCGACCTGCCCGACCCCGGCCTTGTCATGACCGGCACCAAGTGTGGAGAGGGCAAGGTGTGCAAAGACCGCCGATGCCAAAATGCCTCTTTTACCGAGCTGGAGACTTGCATCGCACGCTGTCGCGGCAAAGGGGTGTGTAACAGTAACGGGAACTGCCACTGTAATCGCGGCTGGGCACCACCCTTCTGTGAGAAGCCAGGACTCGGCGGCAGCGTGGACAGTGGACCTGTCCAGTATGACaGTCAGGTAGGGCTGGTGGTGGGGCTGCTGTTTGCCTTCCTGTTGGTCCTGCCTGTGGTGCTGCTGCTCTTCTACTGCTACAGGATCAAGACTTCCTATTACCACAAGTGGCTTTCCCAGAGAGAGAAGAACAAGAGCAACAAGATGGAGGTATCGGTGGAGAAAGGGAAGAATGGCCATCTGAATCCTGCCTTTCACTTGAAGGTGGTCGGACCAATCAACAAAGCTAGCGGCCACAAGGggCTCCCTCACACCAACAAAGAGGTCCTGCCTCTCAGACCGGGCCCAACTGCCAATGGCATGCAGCCAGTCAACATTGTGCGACCTCTGAGACCTGCCCAGTCTCCCCAGGGTGGTCCTGGGAACCTCAAGGTGGCTCGCCCGCCTCTGCCAGCTGGCAAGCCCCCAGCAGCCCCACCCAAATCCCCTGCAACCCCACAGAGACTCAGCCCACCCAAGAAACCTCTGCCCCTCAACCCGACACGATCTCCACTGTTAGTGTCTGAGCTGCAGCCCAGACCGTCCCCCTTCCCTCCTCAGAGGCCTCTCCCACTTAGCCCAGCCAGAGGCGCCTCCCCCACAGTCAGTCCAGCCCGGATTCTGGTCTCCAAACCGTCCCCTGGCCTACTGGTCATGATGTCCCCGGCAGTGGGACCCAAACCTGTGGGCAAAGTCTCAGCCATCCCCCCTCTCAGAGCTCTCAGACCGATCCCAGGTGCCAAACCAAACACAGCCTCGCCTCCGCCACGAAAATGACCTTCTCCTCCCCCCTCCACCCTCAGAGGAGGCAGCAGCTGACAGCCTATTTGCACTAAAGGGACTTGGCTGGTAAACCACAGAGCTGTCGACCATACCAGAGCAGGACGAACACAAAGTAAAAAcctgagacacaaaagaacaaacAGGACTCTTAACAGTTCAGACTTTAAAAGGAAACCTTaccccccccctctcattctcaATTTTGACACCCTCCACCCCACATCCTCCCAGCGTGCTCACATTAACCACCATGACGCGGTTTTGCACGGAGGCCTTGCAGACTGAGACAAGTGTTATCGCTGGGTGTCAGTCACATTTGCCaaatttttttatgattattgttttttaatctgTTAATGCTGTCTGTGTATAAAAACCGTTTTTGTAACttgttttgtttacagtttgttttaTGTCTTGTTTTATGATTTATGTTATGTGCCAAAGAGGTCTTTTCATACCTGGGGTTGTGTCCCGAACGCTTGAAAATCTTATCTTCTTATGTCACGTTAAGTTTACAACAAGTCAACTCCATATTTTTAGGTTTTataatttattgtattgtatgagGAATGTCTAAAATACAAATCTGGAGATACTGTGGCCTATCGGTAGGAAGGAGAGCCAATCACACAGCAGCTTCTTTTCAACACTGTTTACATGGTGGAGGATTTGATGAATGCTTGGGACTTGCAGGACACACCTCAGTCGTTCATGTTGATttgaatgtctgtgtgttatgacttttgaattacataaaatatttttaacaaaa

Function

GO: NA

KEGG:

id description
K08616 ADAM33; disintegrin and metalloproteinase domain-containing protein 33

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU190063 lncRNA downstream 129523 3674091 ~ 3674463 (-) True G140926
TU190054 lncRNA downstream 217729 3582712 ~ 3586257 (-) True G140917
TU190053 lncRNA downstream 217729 3583757 ~ 3586257 (-) False G140917
TU190045 lncRNA downstream 224634 3523129 ~ 3579352 (-) True G140910
TU190020 lncRNA downstream 323643 3480015 ~ 3480343 (-) True G140892
TU190146 lncRNA upstream 90783 4209167 ~ 4210770 (-) True G140999
TU190190 lncRNA upstream 156267 4274651 ~ 4275274 (-) False G141027
TU190194 lncRNA upstream 156267 4274651 ~ 4275274 (-) False G141027
TU190195 lncRNA upstream 156267 4274651 ~ 4275274 (-) False G141027
TU190199 lncRNA upstream 156267 4274651 ~ 4275274 (-) False G141027
XM_039823625.1 mRNA downstream 346138 3455520 ~ 3457848 (-) True LOC120573709
XM_039823056.1 mRNA downstream 551011 3166868 ~ 3252975 (-) True focad
XM_039823321.1 mRNA downstream 660797 3139121 ~ 3143189 (-) True LOC120573530
XM_039823055.1 mRNA downstream 675370 3117234 ~ 3128616 (-) True c14h4orf54
XM_039822857.1 mRNA downstream 985327 2812555 ~ 2818659 (-) True si:dkey-219e21.4
XM_039821295.1 mRNA upstream 138251 4256635 ~ 4259813 (-) True ing2
XM_039823282.1 mRNA upstream 184261 4302645 ~ 4312866 (-) True slx1b
XM_039823323.1 mRNA upstream 203380 4321764 ~ 4331757 (-) True LOC120573533
XM_039822737.1 mRNA upstream 213879 4332263 ~ 4351683 (-) True pygmb
XM_039821578.1 mRNA upstream 235217 4353601 ~ 4368352 (-) True sf1
TU189682 other downstream 1745795 2051481 ~ 2058191 (-) True G140615
TU189195 other downstream 3352316 443550 ~ 451670 (-) True G140274
unassigned_transcript_680 other downstream 3376502 427403 ~ 427484 (-) True trnal-aag_5
unassigned_transcript_679 other downstream 3384980 418935 ~ 419006 (-) True trnam-cau_42
unassigned_transcript_678 other downstream 3386905 417010 ~ 417081 (-) True trnam-cau_41
TU190151 other upstream 36540 4154924 ~ 4155547 (-) True G141003
TU190189 other upstream 156267 4274651 ~ 4275274 (-) True G141027
TU190191 other upstream 156267 4274651 ~ 4275274 (-) False G141027
TU190193 other upstream 156267 4274651 ~ 4275274 (-) False G141027
TU190197 other upstream 156267 4274651 ~ 4275274 (-) False G141027

Expression Profile