Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_039823625.1 |
| length | 1148 |
| RNA type | mRNA |
| GC content | 0.44 |
| exon number | 5 |
| gene id | LOC120573709 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053125.1 |
| NCBI id | CM020922.1 |
| chromosome length | 39125861 |
| location | 3455520 ~ 3457848 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| id | name | namespace |
|---|---|---|
| GO:0006334 | nucleosome assembly | biological_process |
| GO:0007275 | multicellular organism development | biological_process |
| GO:0000786 | nucleosome | cellular_component |
| GO:0001740 | Barr body | cellular_component |
| GO:0003677 | DNA binding | molecular_function |
| GO:0046982 | protein heterodimerization activity | molecular_function |
| id | description |
|---|---|
| K11251 | H2A; histone H2A |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU190009 | lncRNA | downstream | 154 | 3455015 ~ 3455366 (-) | True | G140882 |
| TU190005 | lncRNA | downstream | 17023 | 3438119 ~ 3438497 (-) | True | G140878 |
| TU190004 | lncRNA | downstream | 17914 | 3437385 ~ 3437606 (-) | True | G140877 |
| TU190002 | lncRNA | downstream | 19328 | 3435918 ~ 3436192 (-) | True | G140875 |
| TU190001 | lncRNA | downstream | 20160 | 3435060 ~ 3435360 (-) | True | G140874 |
| TU190020 | lncRNA | upstream | 22167 | 3480015 ~ 3480343 (-) | True | G140892 |
| TU190045 | lncRNA | upstream | 65281 | 3523129 ~ 3579352 (-) | True | G140910 |
| TU190054 | lncRNA | upstream | 124864 | 3582712 ~ 3586257 (-) | True | G140917 |
| TU190053 | lncRNA | upstream | 125909 | 3583757 ~ 3586257 (-) | False | G140917 |
| TU190063 | lncRNA | upstream | 216243 | 3674091 ~ 3674463 (-) | True | G140926 |
| XM_039823056.1 | mRNA | downstream | 202545 | 3166868 ~ 3252975 (-) | True | focad |
| XM_039823321.1 | mRNA | downstream | 312331 | 3139121 ~ 3143189 (-) | True | LOC120573530 |
| XM_039823055.1 | mRNA | downstream | 326904 | 3117234 ~ 3128616 (-) | True | c14h4orf54 |
| XM_039822857.1 | mRNA | downstream | 636861 | 2812555 ~ 2818659 (-) | True | si:dkey-219e21.4 |
| XM_039822909.1 | mRNA | downstream | 685915 | 2678945 ~ 2769605 (-) | False | pde5ab |
| XM_039822508.1 | mRNA | upstream | 346138 | 3803986 ~ 4118384 (-) | True | adam19a |
| XM_039821295.1 | mRNA | upstream | 798787 | 4256635 ~ 4259813 (-) | True | ing2 |
| XM_039823282.1 | mRNA | upstream | 844797 | 4302645 ~ 4312866 (-) | True | slx1b |
| XM_039823323.1 | mRNA | upstream | 863916 | 4321764 ~ 4331757 (-) | True | LOC120573533 |
| XM_039822737.1 | mRNA | upstream | 874415 | 4332263 ~ 4351683 (-) | True | pygmb |
| TU189682 | other | downstream | 1397329 | 2051481 ~ 2058191 (-) | True | G140615 |
| TU189195 | other | downstream | 3003850 | 443550 ~ 451670 (-) | True | G140274 |
| unassigned_transcript_680 | other | downstream | 3028036 | 427403 ~ 427484 (-) | True | trnal-aag_5 |
| unassigned_transcript_679 | other | downstream | 3036514 | 418935 ~ 419006 (-) | True | trnam-cau_42 |
| unassigned_transcript_678 | other | downstream | 3038439 | 417010 ~ 417081 (-) | True | trnam-cau_41 |
| TU190151 | other | upstream | 697076 | 4154924 ~ 4155547 (-) | True | G141003 |
| TU190189 | other | upstream | 816803 | 4274651 ~ 4275274 (-) | True | G141027 |
| TU190191 | other | upstream | 816803 | 4274651 ~ 4275274 (-) | False | G141027 |
| TU190193 | other | upstream | 816803 | 4274651 ~ 4275274 (-) | False | G141027 |
| TU190197 | other | upstream | 816803 | 4274651 ~ 4275274 (-) | False | G141027 |
