Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_005641701.1 |
| length | 532 |
| lncRNA type | inter_gene |
| GC content | 0.44 |
| exon number | 3 |
| gene id | LOC120573382 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053125.1 |
| NCBI id | CM020922.1 |
| chromosome length | 39125861 |
| location | 625213 ~ 626442 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU189213 | lncRNA | downstream | 68546 | 556402 ~ 556667 (-) | True | G140291 |
| XR_005641418.1 | lncRNA | downstream | 102155 | 500240 ~ 523058 (-) | True | LOC120572316 |
| TU189206 | lncRNA | downstream | 125597 | 499258 ~ 499616 (-) | True | G140285 |
| TU189196 | lncRNA | downstream | 182198 | 442656 ~ 443015 (-) | True | G140275 |
| XR_005641692.1 | lncRNA | downstream | 203684 | 420927 ~ 421529 (-) | True | LOC120573351 |
| TU189229 | lncRNA | upstream | 6285 | 632727 ~ 632947 (-) | True | G140307 |
| TU189230 | lncRNA | upstream | 7204 | 633646 ~ 633845 (-) | True | G140308 |
| TU189236 | lncRNA | upstream | 120146 | 746588 ~ 746860 (-) | True | G140314 |
| TU189266 | lncRNA | upstream | 249380 | 875822 ~ 876346 (-) | True | G140338 |
| TU189276 | lncRNA | upstream | 276966 | 903408 ~ 903639 (-) | True | G140348 |
| XM_039823400.1 | mRNA | downstream | 18495 | 600634 ~ 606718 (-) | False | LOC120573590 |
| XM_039823401.1 | mRNA | downstream | 18495 | 600634 ~ 606718 (-) | True | LOC120573590 |
| XM_039823396.1 | mRNA | downstream | 486976 | 135443 ~ 138237 (-) | True | LOC120573587 |
| XM_039823311.1 | mRNA | upstream | 280103 | 906545 ~ 913680 (-) | True | LOC120573525 |
| XM_039822700.1 | mRNA | upstream | 391816 | 1018258 ~ 1429717 (-) | False | sorcs2 |
| XM_039822701.1 | mRNA | upstream | 391816 | 1018258 ~ 1429717 (-) | False | sorcs2 |
| XM_039822699.1 | mRNA | upstream | 391816 | 1018258 ~ 1429717 (-) | False | sorcs2 |
| XM_039822698.1 | mRNA | upstream | 391816 | 1018258 ~ 1429717 (-) | False | sorcs2 |
| TU189195 | other | downstream | 173543 | 443550 ~ 451670 (-) | True | G140274 |
| unassigned_transcript_680 | other | downstream | 197729 | 427403 ~ 427484 (-) | True | trnal-aag_5 |
| unassigned_transcript_679 | other | downstream | 206207 | 418935 ~ 419006 (-) | True | trnam-cau_42 |
| unassigned_transcript_678 | other | downstream | 208132 | 417010 ~ 417081 (-) | True | trnam-cau_41 |
| unassigned_transcript_677 | other | downstream | 209345 | 415797 ~ 415868 (-) | True | trnam-cau_40 |
| TU189682 | other | upstream | 1425039 | 2051481 ~ 2058191 (-) | True | G140615 |
| TU190151 | other | upstream | 3528482 | 4154924 ~ 4155547 (-) | True | G141003 |
| TU190189 | other | upstream | 3648209 | 4274651 ~ 4275274 (-) | True | G141027 |
| TU190191 | other | upstream | 3648209 | 4274651 ~ 4275274 (-) | False | G141027 |
| TU190193 | other | upstream | 3648209 | 4274651 ~ 4275274 (-) | False | G141027 |
