Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_005641774.1 |
| length | 139 |
| RNA type | snoRNA |
| GC content | 0.50 |
| exon number | 1 |
| gene id | LOC120573734 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053125.1 |
| NCBI id | CM020922.1 |
| chromosome length | 39125861 |
| location | 6335494 ~ 6335632 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU191040 | lncRNA | downstream | 25599 | 6308898 ~ 6309895 (-) | False | sox19b |
| TU191020 | lncRNA | downstream | 68911 | 6266151 ~ 6266583 (-) | True | G141613 |
| TU191019 | lncRNA | downstream | 69469 | 6265440 ~ 6266025 (-) | True | G141612 |
| TU191007 | lncRNA | downstream | 129764 | 6199308 ~ 6205730 (-) | False | gal3st4 |
| TU190999 | lncRNA | downstream | 178081 | 6156052 ~ 6157413 (-) | True | G141601 |
| TU191049 | lncRNA | upstream | 40366 | 6375998 ~ 6378372 (-) | False | tbc1d14 |
| TU191105 | lncRNA | upstream | 120307 | 6455939 ~ 6511995 (-) | True | G141667 |
| TU191122 | lncRNA | upstream | 222666 | 6558298 ~ 6645212 (-) | True | G141683 |
| TU191127 | lncRNA | upstream | 241545 | 6577177 ~ 6578755 (-) | True | G141688 |
| TU191192 | lncRNA | upstream | 1059527 | 7395159 ~ 7462473 (-) | True | G141741 |
| XM_039823555.1 | mRNA | downstream | 19677 | 6309459 ~ 6315817 (-) | True | sox19b |
| XM_039821509.1 | mRNA | downstream | 91825 | 6237573 ~ 6243669 (-) | True | tm4sf21b |
| XM_039821425.1 | mRNA | downstream | 104197 | 6226997 ~ 6231297 (-) | True | LOC120572220 |
| XM_039823018.1 | mRNA | downstream | 115234 | 6186311 ~ 6220260 (-) | False | gal3st4 |
| XM_039823017.1 | mRNA | downstream | 115234 | 6186311 ~ 6220260 (-) | False | gal3st4 |
| XM_039822036.1 | mRNA | upstream | 7997 | 6343629 ~ 6361111 (-) | True | senp3b |
| XM_039823095.1 | mRNA | upstream | 30339 | 6365971 ~ 6367776 (-) | True | LOC120573386 |
| XM_039821491.1 | mRNA | upstream | 34054 | 6369686 ~ 6371100 (-) | False | LOC120572256 |
| XM_039823420.1 | mRNA | upstream | 40340 | 6375972 ~ 6416457 (-) | False | tbc1d14 |
| XM_039823419.1 | mRNA | upstream | 40340 | 6375972 ~ 6416452 (-) | True | tbc1d14 |
| XR_005641400.1 | other | downstream | 104197 | 6221971 ~ 6231297 (-) | False | LOC120572220 |
| XR_005641401.1 | other | downstream | 108688 | 6221971 ~ 6226806 (-) | False | LOC120572220 |
| unassigned_transcript_683 | other | downstream | 306572 | 6028841 ~ 6028922 (-) | True | trnas-uga_22 |
| unassigned_transcript_681 | other | downstream | 378362 | 5957051 ~ 5957132 (-) | True | trnal-aag_6 |
| TU190760 | other | downstream | 492348 | 5743559 ~ 5843146 (-) | False | G141439 |
| XR_005641775.1 | other | upstream | 989 | 6336621 ~ 6336759 (-) | True | LOC120573735 |
| TU191048 | other | upstream | 17832 | 6353464 ~ 6371093 (-) | True | LOC120572256 |
| TU191047 | other | upstream | 34066 | 6369698 ~ 6371093 (-) | False | LOC120572256 |
| TU191399 | other | upstream | 1446312 | 7781944 ~ 7787595 (-) | False | fcer1g |
| unassigned_transcript_685 | other | upstream | 1501589 | 7837221 ~ 7837294 (-) | True | trnar-ucu_15 |
