RNA id: unassigned_transcript_661



Basic Information


Item Value
RNA id unassigned_transcript_661
length 82
RNA type tRNA
GC content 0.59
exon number 1
gene id trnal-uag
representative True

Chromosome Information


Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 380167 ~ 380248 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


GGTAGTGTGGCCGAGTGGTCTAAGGCGCTGGATTTAGGCTCCAGTCTCTCTGGaggcgtgggttcaaatcccaccacTGCCA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU189189 lncRNA downstream 5951 373837 ~ 374216 (-) True G140268
XR_005641430.1 lncRNA downstream 11047 368338 ~ 369120 (-) True LOC120572356
TU189185 lncRNA downstream 42404 337542 ~ 337763 (-) True G140264
TU189175 lncRNA downstream 70546 309384 ~ 309621 (-) True G140254
TU189170 lncRNA downstream 99304 280547 ~ 280863 (-) True G140249
TU189191 lncRNA upstream 39768 420016 ~ 420235 (-) True G140270
XR_005641692.1 lncRNA upstream 40679 420927 ~ 421529 (-) True LOC120573351
TU189196 lncRNA upstream 62408 442656 ~ 443015 (-) True G140275
TU189206 lncRNA upstream 119010 499258 ~ 499616 (-) True G140285
XR_005641418.1 lncRNA upstream 119992 500240 ~ 523058 (-) True LOC120572316
XM_039823396.1 mRNA downstream 241930 135443 ~ 138237 (-) True LOC120573587
XM_039823400.1 mRNA upstream 220386 600634 ~ 606718 (-) False LOC120573590
XM_039823401.1 mRNA upstream 220386 600634 ~ 606718 (-) True LOC120573590
XM_039823311.1 mRNA upstream 526297 906545 ~ 913680 (-) True LOC120573525
XM_039822700.1 mRNA upstream 638010 1018258 ~ 1429717 (-) False sorcs2
XM_039822701.1 mRNA upstream 638010 1018258 ~ 1429717 (-) False sorcs2
unassigned_transcript_660 other downstream 585 379511 ~ 379582 (-) True trnam-cau_27
unassigned_transcript_662 other upstream 1452 381700 ~ 381781 (-) True trnal-aag_3
unassigned_transcript_663 other upstream 2528 382776 ~ 382847 (-) True trnam-cau_28
unassigned_transcript_664 other upstream 3192 383440 ~ 383521 (-) True trnal-uag_1
unassigned_transcript_665 other upstream 5029 385277 ~ 385358 (-) True trnal-aag_4
unassigned_transcript_666 other upstream 8303 388551 ~ 388622 (-) True trnam-cau_29