RNA id: unassigned_transcript_674



Basic Information


Item Value
RNA id unassigned_transcript_674
length 72
RNA type tRNA
GC content 0.60
exon number 1
gene id trnam-cau_37
representative True

Chromosome Information


Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 408549 ~ 408620 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


agcagagtgGCGCAGCGGAAGCGTGCTGGGCCCATAACCCAGAGGTCGATGGATCGAAACCATCCTCTGcta

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU189189 lncRNA downstream 34333 373837 ~ 374216 (-) True G140268
XR_005641430.1 lncRNA downstream 39429 368338 ~ 369120 (-) True LOC120572356
TU189185 lncRNA downstream 70786 337542 ~ 337763 (-) True G140264
TU189175 lncRNA downstream 98928 309384 ~ 309621 (-) True G140254
TU189170 lncRNA downstream 127686 280547 ~ 280863 (-) True G140249
TU189191 lncRNA upstream 11396 420016 ~ 420235 (-) True G140270
XR_005641692.1 lncRNA upstream 12307 420927 ~ 421529 (-) True LOC120573351
TU189196 lncRNA upstream 34036 442656 ~ 443015 (-) True G140275
TU189206 lncRNA upstream 90638 499258 ~ 499616 (-) True G140285
XR_005641418.1 lncRNA upstream 91620 500240 ~ 523058 (-) True LOC120572316
XM_039823396.1 mRNA downstream 270312 135443 ~ 138237 (-) True LOC120573587
XM_039823400.1 mRNA upstream 192014 600634 ~ 606718 (-) False LOC120573590
XM_039823401.1 mRNA upstream 192014 600634 ~ 606718 (-) True LOC120573590
XM_039823311.1 mRNA upstream 497925 906545 ~ 913680 (-) True LOC120573525
XM_039822700.1 mRNA upstream 609638 1018258 ~ 1429717 (-) False sorcs2
XM_039822701.1 mRNA upstream 609638 1018258 ~ 1429717 (-) False sorcs2
unassigned_transcript_673 other downstream 1525 406953 ~ 407024 (-) True trnam-cau_36
unassigned_transcript_672 other downstream 4775 403703 ~ 403774 (-) True trnam-cau_35
unassigned_transcript_671 other downstream 9719 398759 ~ 398830 (-) True trnam-cau_34
unassigned_transcript_670 other downstream 11307 397171 ~ 397242 (-) True trnam-cau_33
unassigned_transcript_669 other downstream 13378 395100 ~ 395171 (-) True trnam-cau_32
unassigned_transcript_675 other upstream 1117 409737 ~ 409808 (-) True trnam-cau_38
unassigned_transcript_676 other upstream 4748 413368 ~ 413439 (-) True trnam-cau_39
unassigned_transcript_677 other upstream 7177 415797 ~ 415868 (-) True trnam-cau_40
unassigned_transcript_678 other upstream 8390 417010 ~ 417081 (-) True trnam-cau_41
unassigned_transcript_679 other upstream 10315 418935 ~ 419006 (-) True trnam-cau_42