RNA id: XM_039825339.1


Basic Information

Item Value
RNA id XM_039825339.1
length 3422
RNA type mRNA
GC content 0.44
exon number 3
gene id wfikkn2a
representative True

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 10628446 ~ 10632635 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

AACAGGATCTCCAAATAACAAAGACTAGAAGACTAGTGTGTTTGGTGCCATCTTctggagactgacattttgttCAGATGGAAAGGAGAGACTTTAGTGTAAACGGTGCTAAATGATAATGCAGTATTATAGTGCACAGTATTGTCACACAGTGCTGTTTTAATTTGGTGCATATTAACAAGACagacaaagtttttttttattgcagacATACTCAAAGCGTCTTCTAATATCAGAACACAATAATAACTttgctaaaatgaaagatgtagtCTATCAGCACTGATAAATAGAAGTATATGACTGTAACACAAAATGTAGCCATTTGTATAGATTATATTCAGTAGCTTGTATCTTTACACgtttttgtttaaatgtgcgaacatcaaaaatgtttaatttttacACTAATTTTATAATAAGGTATCAACTATTCTTTTTAGAGTATTGCTAAATATCTTCTTCTCCTTTGCAAGCTAAGGGTTAAGGCAGCCAGCGCCTTGCGCACAGGTGTCTTGCCAGTCCTTTATGAAACAGCGCCTGCAATCTGCTGGcgaactttctttttttttttctttaattaagtTGATCATAACTGTAACTCAGCTGGGATTTTCTGTCCCACTAGACAGGCCACTGTAATTCATGTAGTTAGATCTTAAGTGGGTTTGCTGGCCGTAGCCCTAATCTCTCGCAACTATTAAACGTGGAGCGACTAACCTGGAGTGCTCTCCACATCGAGACCGGTCCTGCACGCCCTTGTTTCGCTGCTTTTGTGCCGCATGTGATTCCAGTTGTTAGAAAACGAATTACGCGAGAGTTTGGACATAGTCTCAAGAGTTCTCCTCAAACTTTTAAGTCGTGTTCAACTTCTTGCattttcaagattttttttaGCGTCCATTCTGTTACGCGTCGGATATGTGGTGGATGCTGTTTCCACGATGGATTTGGTTTCTTCTGGGACATTGTTATACCATACTCCTTTATATGGACAGCTGCCGCGTGAGAGCAATGCCCATGCCCATGTCTGTGGCAAAAGTGGTGTACTCTCACGCAGGTCTGTGCCCGAATGACCTGAACCCCAACCTGTGGGTGGATGCTATGAGCACCTGCATGCGCGAGTGCGAATCTGACCAGGACTGTGAGACATTTGAGAAGTGCTGCCCTAATGTATGTGGCAACAAGAGCTGTGTGGCATCACGCTATATAGACGTCAAGGGCAACAAGGGCCCCATTGGAATGCCAGAGGGCGCCACCTGCGACAAGTTCATGTGCTCTCAGCAAGGGTCCGAGTGCGACATCTGGGATGGCCAGCCTGTTTGCAAGTGCCGGGACCGCTGTGAGAGAGAACCCCACTTCACGTGTGCGTCTGACGGCATGACATACTATAACAAGTGCTACATGGATGCCGAGGCCTGTTCCAAGGGTATCTCTATTTCTGAGGTCACCTGCAGGTACCACCTGACCTGGCCAAACACCAGTCCAATCCCAGCAGAGACAACATTACATCCTACCACCGCCCTCCAGACCACCCTCCCAGCTGACATCCAGCTCCCCACCATACACAGCGGCCCCACCCAGCTGGCTGTTTTTGTGGGTGAGACAGCTAGCTTCCTGTGCGATGTCTCTGGGAAACCACATCCGGAAATCACCTGGGAGAAACAACTGAAGGGCAAAGATAACACCATAATGAGACCTAATCATGTCCGAGGCAACGTTGTGGTCACTAACATTGGCCAGCTGGTCATATACAATGCGCAACTTCAGGATGCCGGCATCTATACGTGTACAGCCAAAAACGTTGGGGGAAGTGTATCGTCACACTTTCCCTTGGTAGTGATCAGGAAGGAGGCGAAAGGTAAGAATGGAGAGGGGAATAGTACCAACCTGCCGTTTTCAGCTGAAGAGTGTCTTAAAAGTCCAGACACAGATGGCTGTGGAGAAGAGAGCATGAGCTGGTACTATGAACCAAAGAGGAACAATTGCTTCACCTTCACCTACAGTCAGTGCAATAAAAACCGTAACCATTTCGACACCTATGAAGCCTGCATGCTGTCATGCGGAGGAGAGCTGGCGGCTCCGTGCAGCCTACCGAGCCTCCAAGGGCCTTGCAAAGCATACGAGCCTCGCTGGGCTTACAGCAGCGGCCTCAAAAAGTGCCAGTCCTTTGTGTACGGAGGGTGCGGTGGCAACGAGAACAACTTTGAGTCTAAAGAGGCCTGTGAAGAGATGTGTCCCTTTCTGAAAAACCACAACTGCAAGATATGTAAACCCCGAGCCAAGATGGTCACCAGCTTCTGCAAAAGTGACTTTGTGATCCTCGGGCGTGTGACCGAGCTGACGGAGGAGCAAGAGTCTGGCCATGCTTTGGTGACAGTAGAAGAGATCTTGAAGGACGAGAAGATGGGTCTGAGGTTTTTTGGCAAAGAGCCCCTGGAGGTGACTCTTCTGAACATGGACTGGAACTGCCCGTGCCCCAATATCACTACAGCCGACGGGCAGCTCATCATCATGGGGGATGTTCAAAATGGCATGGCCGTTCTGCAGCCCGACAGCTTCGTAGGCTCCTCCAGCACTCGTAGAATCAGGAAGCTTCGCGAGGTTATTCACAAGAAAACCTGTGATTTCCTTAAAGATTTCTCTGTCGTCCAGTAGTCTCTTAAAGTCTCACACTCACTAAAAGTCTTTTGTCTCATGTTTTCTGATTATTCCAAGCTCCAGTGACCTCACTCACCAGTCTGAATGACTGCCagtaaacataaaacataacttATCTGTAACATTGGAGGTTTTGTTGCCTGATTCAGATGGTTTTTCTTGTCTTACTTTGTTCCTTATTGCTCAATAGATCCCTCCTcgtagtttttgtttttgacaCTGATCATTTTTTATCAGTTTTCATTCATGATTTCTTCAAAGATGCTGTGTCAACATGGTCCTAAtcgctcttttttttaaataagaatcAAGCTTGCACCTAGGGCACACTGTCTGGAAAAGGTGCAGGTAGAATAGCCCCAAGCATTTACCCTGTACAAAGTATTTAATCTTTAGTAAACTGTTTACTAAAAAAGTATTATAGATTtcctttccaaatgttatcttGAATACACTAAtaccattcattttaaaaatatgtttaaatattAGTAGGCTatgtttgctttatgtttttgtgggtTATCCCAAGATAGACAGTGTGTAACATCTGTCCGCACTTGAGCTCACAATAATGCAGTTTGAACCCTCAGTTTATTTACCAGAATCAAATAAGCTCTTTGGTTTCATATTTTGTGGAATCCATTTTCATAAGTTTTAATTTACAATACAGAATATGTATGTGGACTTCTGtactatgtatttatttttcttgatCTATTTGATATGGCCAtttgatatatatgtatatctctctctct

Function

GO: NA

KEGG:

id description
K23621 WFIKKN; WAP, Kazal, immunoglobulin, Kunitz and NTR domain-containing protein

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU208283 lncRNA upstream 25482 10602417 ~ 10602964 (+) True G153740
TU208227 lncRNA upstream 229093 10399125 ~ 10399353 (+) True G153684
TU208163 lncRNA upstream 392507 10169942 ~ 10235939 (+) True G153640
TU207800 lncRNA upstream 675091 9950608 ~ 9953355 (+) True LOC120574664
XR_005641880.1 lncRNA upstream 677574 9948607 ~ 9950872 (+) False LOC120574664
TU208356 lncRNA downstream 76733 10709368 ~ 10709629 (+) True G153799
TU208383 lncRNA downstream 154227 10786862 ~ 10818172 (+) False G153817
TU208380 lncRNA downstream 180093 10812728 ~ 10818172 (+) True G153817
TU208497 lncRNA downstream 299084 10931719 ~ 10932529 (+) True G153875
TU208521 lncRNA downstream 334995 10967630 ~ 10969844 (+) True G153892
XM_039825338.1 mRNA upstream 3906 10618653 ~ 10624540 (+) True ankrd40
XM_039824434.1 mRNA upstream 53269 10418021 ~ 10575177 (+) True cacna1ia
XM_039824731.1 mRNA downstream 193868 10826503 ~ 10828557 (+) True LOC120574456
XM_039824734.1 mRNA downstream 196698 10829333 ~ 10832063 (+) True LOC120574457
XM_039825944.1 mRNA downstream 213109 10845744 ~ 10854576 (+) True LOC120575243
XM_039825942.1 mRNA downstream 213111 10845746 ~ 10854576 (+) False LOC120575243
XM_039825943.1 mRNA downstream 213114 10845749 ~ 10854576 (+) False LOC120575243
TU208172 other upstream 286823 10250377 ~ 10341623 (+) True G153646
TU207863 other upstream 561704 10065460 ~ 10066742 (+) True G153433
unassigned_transcript_846 other upstream 653873 9973204 ~ 9974573 (+) True LOC120574581
unassigned_transcript_845 other upstream 689842 9938019 ~ 9938604 (+) True LOC120574658
unassigned_transcript_844 other upstream 692165 9935671 ~ 9936281 (+) True LOC120574414
TU208368 other downstream 119525 10752160 ~ 10752898 (+) True G153808
XR_005641865.1 other downstream 431787 11064422 ~ 11073826 (+) False LOC120574482
TU209004 other downstream 1453226 12085861 ~ 12115192 (+) True G154254
TU209291 other downstream 2210788 12843423 ~ 12846597 (+) True G154461
TU209346 other downstream 2384351 13016986 ~ 13020668 (+) False LOC120574968

Expression Profile