RNA id: XM_039778674.1


Basic Information

Item Value
RNA id XM_039778674.1
length 531
RNA type mRNA
GC content 0.51
exon number 3
gene id atp5l
representative True

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 28804378 ~ 28808441 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

AGGCAGTTGTGTGGTCAGCTGCTGAGACAGGTCCTGCTCCTGGAGGTGACATTCAGTCGGCTAGCAGGAAACGGGGGTGCAGTTAGCATCGACGAAACACTTCAACATGGCACAGGCAGTGCAGAAACTTGTCGCTAAAGTACCTACCCTGCTCGGCGCCGCTGTCACCTACTCAAAACCTCGGCTAGCAACCTTCTGGTACTATGCCCGTGTCGAACTTGTCCCCCCTTCCCCTGCCGAGATCCCCAAGGCCATCGAGGGGGCCACAAACCTCATCAAGGGTGTCCAGTCAGGACGTCTCGGTCAAACCACAGTGAAGGATGCTTTAAGGAACGGACTGGTGGCCACTGAAGTGTTGATGTGGTTCTACATTGGAGAGTGCATCGGCAAAGGAGGCATTGTCGGCTATGCTGTCTGAAATTTGGACTGTCATACTTTTTCTCTTCTTCGTTTGAGCGTTGTACGTTCAACTTCCTGTAAGAATCCTGGGAACCAATAAACAGATgtctattgttaaaaaaaaaaaaaaga

Function

GO:

id name namespace
GO:0015986 ATP synthesis coupled proton transport biological_process
GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) cellular_component
GO:0015078 proton transmembrane transporter activity molecular_function

KEGG:

id description
K02140 ATPeFG, ATP5L, ATP20; F-type H+-transporting ATPase subunit g

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU229931 lncRNA downstream 42733 28757543 ~ 28761645 (-) True G169551
TU229934 lncRNA downstream 42733 28757782 ~ 28761645 (-) False G169551
TU229930 lncRNA downstream 42733 28758134 ~ 28761645 (-) False G169551
TU229929 lncRNA downstream 48827 28753275 ~ 28755551 (-) True G169550
TU229900 lncRNA downstream 99757 28699821 ~ 28704621 (-) True G169524
TU230020 lncRNA upstream 35983 28844424 ~ 28849113 (-) True G169612
TU230030 lncRNA upstream 57040 28865481 ~ 28867088 (-) True G169620
TU230051 lncRNA upstream 137869 28946310 ~ 28946656 (-) True G169640
TU230059 lncRNA upstream 191039 28999480 ~ 28999737 (-) True G169648
TU230092 lncRNA upstream 340643 29149084 ~ 29150478 (-) True G169678
XM_039778637.1 mRNA downstream 13260 28785102 ~ 28791118 (-) True ftr83
XM_039778676.1 mRNA downstream 21517 28774813 ~ 28782861 (-) True ruvbl2
XM_039778344.1 mRNA downstream 140367 28654877 ~ 28664011 (-) True ube2g1a
XM_039826523.1 mRNA downstream 150894 28635713 ~ 28653484 (-) True ankfy1
XM_039826521.1 mRNA downstream 171559 28594424 ~ 28632819 (-) True zzef1
XM_039776705.1 mRNA upstream 2942 28811383 ~ 28815558 (-) False pdzd3b
XM_039776704.1 mRNA upstream 2942 28811383 ~ 28815558 (-) True pdzd3b
XM_039777812.1 mRNA upstream 67549 28875990 ~ 28877885 (-) True ptrh2
XM_039777813.1 mRNA upstream 67549 28875990 ~ 28877747 (-) False ptrh2
XM_039778212.1 mRNA upstream 163027 28971468 ~ 28977378 (-) False rnft1
TU229887 other downstream 140327 28655157 ~ 28664051 (-) False ube2g1a
XR_005642041.1 other downstream 456888 28314437 ~ 28347490 (-) False LOC120575713
TU229743 other downstream 581128 28217243 ~ 28223250 (-) True srrm3
XR_005636427.1 other downstream 776601 27930539 ~ 28027777 (-) False LOC120544024
XR_005636444.1 other downstream 1074230 27719805 ~ 27730148 (-) False gusb
TU230221 other upstream 954008 29762449 ~ 29796427 (-) True LOC120544028
XR_005636389.1 other upstream 1074365 29882806 ~ 29901937 (-) False LOC120543707
TU230376 other upstream 1137227 29945668 ~ 29948932 (-) False map6a
TU230433 other upstream 1498408 30306849 ~ 30310587 (-) False LOC120543993
TU230450 other upstream 1602810 30411251 ~ 30414693 (-) False si:ch73-1a9.3

Expression Profile