RNA id: XR_005636545.1



Basic Information


Item Value
RNA id XR_005636545.1
length 458
lncRNA type inter_gene
GC content 0.43
exon number 5
gene id LOC120544726
representative True

Chromosome Information


Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 29925067 ~ 29926453 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


TGAGGAACGTGATTCAACTAGCCAACTGGTGTTGATTCATAACGCACATTGACGTTACAGCTTTGTTGCTGCCGCGCCGAACAGCCTTCACTTGGACTTCGTTGTGAGGCAGATTACTGTTAAGCGGTAGAGTGTACGGCTAAGGACGATAACGGACCTGTCCTACACTGAAGGAATGACTTTACCTAGCTACGCTGAAGGAATAAAACAGTGGCCAAGATGTTGATAAAGGTAAAATGCGGAGGGACAAAGAAATATGTTAAAATGGAAGACGTCAGCTTCTCAGACTTTATCAGTGCAGTTCAGCAGAAGTTTCTCATACCAGAAAGTACACCACTAAAAGTCACAGATGAGCAAGGCATAGAGGTGGACGAGGATGTCTTTCCAGAACTTGCAACAGCCAaagaaatatgttttatcatcTACACTGAAAATGAGATCCCACTATTAGAATCTTT

Function


GO: NA

KEGG:

id description
ko04113 Meiosis - yeast

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU230223 lncRNA downstream 135517 29778692 ~ 29789550 (-) True G169766
XR_005636429.1 lncRNA downstream 157491 29763096 ~ 29767576 (-) False LOC120544028
XR_005636430.1 lncRNA downstream 157523 29763096 ~ 29767544 (-) False LOC120544028
XR_005636431.1 lncRNA downstream 157527 29763295 ~ 29767540 (-) False LOC120544028
XR_005636428.1 lncRNA downstream 157532 29763295 ~ 29767535 (-) False LOC120544028
TU230408 lncRNA upstream 119688 30046141 ~ 30115419 (-) True G169905
TU230416 lncRNA upstream 338097 30264550 ~ 30266434 (-) True G169912
TU230427 lncRNA upstream 356627 30283080 ~ 30284166 (-) False ei24
TU230425 lncRNA upstream 356670 30283123 ~ 30284402 (-) False ei24
TU230426 lncRNA upstream 356670 30283123 ~ 30284166 (-) False ei24
XM_039778678.1 mRNA downstream 1555 29920887 ~ 29923512 (-) True LOC120544725
XM_039776864.1 mRNA downstream 12400 29904528 ~ 29912667 (-) False zbtb21
XM_039776865.1 mRNA downstream 14487 29904528 ~ 29910580 (-) True zbtb21
XM_039776867.1 mRNA downstream 23130 29882806 ~ 29901937 (-) False LOC120543707
XM_039776866.1 mRNA downstream 23130 29882807 ~ 29901937 (-) True LOC120543707
XM_039777965.1 mRNA upstream 19606 29946059 ~ 29971080 (-) False map6a
XM_039777967.1 mRNA upstream 19606 29946059 ~ 29971079 (-) False map6a
XM_039777966.1 mRNA upstream 19606 29946059 ~ 29971079 (-) False map6a
XM_039777971.1 mRNA upstream 22884 29949337 ~ 29971078 (-) False map6a
XM_039777968.1 mRNA upstream 25397 29951850 ~ 29971079 (-) False map6a
XR_005636389.1 other downstream 23130 29882806 ~ 29901937 (-) False LOC120543707
TU230221 other downstream 128640 29762449 ~ 29796427 (-) True LOC120544028
TU229954 other downstream 1116637 28804385 ~ 28808430 (-) False atp5l
TU229887 other downstream 1261016 28655157 ~ 28664051 (-) False ube2g1a
XR_005642041.1 other downstream 1577577 28314437 ~ 28347490 (-) False LOC120575713
TU230376 other upstream 19215 29945668 ~ 29948932 (-) False map6a
TU230433 other upstream 380396 30306849 ~ 30310587 (-) False LOC120543993
TU230450 other upstream 484798 30411251 ~ 30414693 (-) False si:ch73-1a9.3
TU230595 other upstream 811602 30738055 ~ 30739267 (-) False LOC120543890
TU230603 other upstream 902614 30829067 ~ 30829943 (-) False LOC120543890

Expression Profile