RNA id: TCONS_00070556


Basic Information

Item Value
RNA id TCONS_00070556
length 2871
RNA type mRNA
GC content 0.53
exon number 13
gene id XLOC_036037
representative False

Chromosome Information

Item Value
chromosome id NC_007119.7
NCBI id CM002892.2
chromosome length 54304671
location 51050554 ~ 51147594 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

CGCTGAGGAGAGAGGAGCGCGCGCACAGCTCAGTGATGCTGGACTACAACATTCAGTAGACACACGCGTGAAgcagtgcacacaaacacatgccaACATAACGCAAAGACAGTCCCAAAAAAACCTTCAGTGACTGAAATACCAGGAGCCCTGTGTTACACTAAGATTTGATGAAGTAGTTTGTGGTGTTTACATTAAGAAACAAAGACAAGTGCTTCCCCTGCAGCGCTGAGCAAGTGCACCTTCACGGAACCTTCAGGAGCAGCCATGGATTCGGAGGACGAACCCTTGTTGATGCAAGGTACATGGAATTTGAGTGAGTTtgaagaggaggatgaaggagAGGCAGAGCAAACAAATGGAGACGAGCAGGTCTGTAAAGGGTTGTGGTGGACTTTGGGATGGGTCTACACGCAGCCCTGGGCGAGTGGGATAGTTCTGGCTGTGGGATTTCTGGTGCCCTTTGCTCTCTCGGCTTACATGTTCCTTCGCTGTGAGCCACTAGACATTGACCTTTCCTACAGTGCATTCGAGGTCAGGAGTCATGCCTCGGCGGAGCGTTTCGATGCTCTCACTATTGCCCTCAAAAGCCAGTTGGGATCTTGGGACAGGCACAGGCGGGACGCCGAGGGATTTGACCTGGAAGCCAATGCTCTGAGGGACCTTTTGTTGCTCATGGTAAACAGGAAAGGAAAGGACGTCTCTGGCATAGCGAATGTCACGGAACCTACAGGGATTTTGGGAAAAGCTGAGGCGGGAGCATACAATGACAACAGGCAGTTTGGAAATGAGAAAAACAAGGAGATGAAAGAGAGGGAAAAAGACTCGAGCATATCCGCAACCCTCAATTCCAGTGATGCCGAAGATCACAAGAAACCAGACTCGCCCTTAATGAGAACCCGTAGGTTTGCGGGCTACCCCTATCTCCAGACCCAAGCCCTTTGGAGGATCGAGCTAGTGTTTGTGGCCCAGGGTGACAAGGATAACAACATCTTCACCCCCGACCGTCTTCACACCATACACCATGTGGAGAGAGTACTAATGCAGCACCCTCAGTTTCAGCAGTTCTGCTGGAAGCCATTGGAGGCGTTGCAGGATTTGCCTCTGGGACCCTCCTTCTGCTCCCCTCCGAGCTCCGTCCTGTCCTACCTCTTTCCCAGTGAGCGAGCAGGGAAGATCTACTATGATGGAATGGGGCCTGATCTTGCTGATATACATGGTGCCCTGAGCTTGGCGATCACCCATCCGCAGTTTTACTGGTACGTGGATGAGTCTCTCACACCAGACAAGCTTCAGTCATCTCTTCTTCGCAGCGAGATCCATTTTGGAGCTCCTCTCCCCTCCTTTTACTCTCTTCAAGACAGACCATTAGAACAGAGACGGCTCTTCAGAGACTTTGTGGTGCAGTATGCAGGCATCCTCGCACAGCAATCCACCAGTAAAGTGAAGGTGTTGTATGGTGGAACAGAGTTATTCGACGATGAGGTGCGCAAGACCTTCAACAGTGACATGTTGCTGGCGTTGTTCAGTGGTGGATGCATCACTGTCCTTGTGTATGTTCTGACTTCTTTTTCTGTGTTTCTGACGTTCTTCGGCTTGGCCAGCATTGGTCTTAGTTGCCTCGTGGCTCTCTTCTTGTATCACGTGGTGTTTGGAGTGAAATATCTCGGCATTCTCAACGGAGTGGCAGCTTTCGTCATCATCGGCATCGGTGTGGATGATGTGTTTGTGTTCATAAGTACATTCAGACAGTCGGTTCATCTGACCTGCCCGATGCAGCGCATGATTTCCACCATGAAGACGGCCGGCAGAGCCACTTTCCTCACGTCCTTCACCACCGCCGCCGCGTACGCTGCAAACACCTTCTCACAGATCCCGGCGGTTCATGACTTCGGTCTGTTCATGTCTCTGATCGTGAGCTGCTGCTGGCTCTGGGTGTCCGTCCTCATGCCTGCTGCCCTCTGCATCTGGAGCTCGTGTGGAGCTGCCCGCGCCAACTCCTGCCCCAGATGGTGGACCACTTTAACGAAACTGTCCAGCAGCCCAGGTCCACTCTCAGATGATGATGACGTGGCTCTGATAACTGTCGAAATGGAACCAGGTGTGTATGACTCTGAACCGGACGCAGCCCTTCTGTCTCTCTCTACAGAAGCTCCTCTGTCCGCGTCCACTGAAGGCAATGTCGGAGTGGTCAGCGCTCATATCCAGAGGCTCCTGAGATGCTGGGTGGCGGAGCCCGTAGTGGAGAAACGCAAAACTATCATAGGTGTGTATGCGGTGGTTCTGCTGGGCTCGGTGTGGTGCTGCTGTCTCCTGCGTCCGGCCAGTCACGCTCCTGTGCTGTTCCACAGAGACACAAACCTGCAGAGACTTCTAGACATGCGCAGTAACCTGAGCGCTCAGGGGATCTCCTGCCATATGTGCTCAGGTGTTTTTATGGAGCGACCTCATAATCTGCACAGCACTGCAGACTTCACAAGCTCTACCTCAGGGAACCATCCCACAATTCCCTCCAACCAGTCCAAACCAGCATCCAACAGCAGCGCACAGACGCTCgcagGTGGGCTGCTGACTGTCTATGTGTTCAAACTGGAGATGGGCTCCGCCGTTCCTCTTTATCGGTATTCACTAAGTGCCAGTGTACCTGCACCCTGGCAGGCTTCATCGGCTGCACACGGAGACGTGCCATCCTTTCAGGCCTACAGCAGTCCCCATAGCAACTTCAGCACGCGGATAAGCGTGTGTGTGTCTCACGCCTATCACCCGCGGCCCCGCTGGATGCTGACGCTGCGCTCGTGTGACGGCAGCCGACGCTGGATTGCAGAGTTCGAGTTTTACGTGGCTTCGGTGGAGCAGCAGCGCAGCAggcga

Function

GO: NA

KEGG:

id description
ko04990 Domain-containing proteins not elsewhere classified

Ensembl:

ensembl_id ENSDART00000166249

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00070553 lncRNA upstream 64079 50979018 ~ 50986475 (+) False XLOC_036036
TCONS_00072291 lncRNA upstream 518366 50531703 ~ 50532188 (+) False XLOC_036030
TCONS_00072290 lncRNA upstream 536521 50508918 ~ 50514033 (+) True XLOC_036029
TCONS_00072289 lncRNA upstream 777076 50256786 ~ 50273478 (+) True XLOC_036027
TCONS_00072288 lncRNA upstream 1008739 50038691 ~ 50041815 (+) True XLOC_036024
TCONS_00072292 lncRNA downstream 33766 51160606 ~ 51165849 (+) True XLOC_036038
TCONS_00072294 lncRNA downstream 454889 51581729 ~ 51586703 (+) False XLOC_036039
TCONS_00072293 lncRNA downstream 454889 51581729 ~ 51586703 (+) True XLOC_036039
TCONS_00072295 lncRNA downstream 598806 51725646 ~ 51726902 (+) True XLOC_036040
TCONS_00072297 lncRNA downstream 648582 51775422 ~ 51778591 (+) False XLOC_036041
TCONS_00070554 mRNA upstream 23013 50983551 ~ 51027541 (+) False XLOC_036036
TCONS_00070555 mRNA upstream 23513 50985798 ~ 51027041 (+) True XLOC_036036
TCONS_00070551 mRNA upstream 87665 50953776 ~ 50962889 (+) True XLOC_036034
TCONS_00070550 mRNA upstream 100005 50946379 ~ 50950549 (+) True XLOC_036033
TCONS_00070549 mRNA upstream 100008 50942240 ~ 50950546 (+) False XLOC_036033
TCONS_00070559 mRNA downstream 580941 51707781 ~ 51726631 (+) False XLOC_036040
TCONS_00070561 mRNA downstream 832128 51958968 ~ 51986997 (+) False XLOC_036042
TCONS_00070560 mRNA downstream 832128 51958968 ~ 51986997 (+) True XLOC_036042
TCONS_00070563 mRNA downstream 1157235 52284075 ~ 52297799 (+) True XLOC_036044
TCONS_00070564 mRNA downstream 1187702 52314542 ~ 52350684 (+) False XLOC_036045
TCONS_00070552 other upstream 82555 50966806 ~ 50967999 (+) True XLOC_036035
TCONS_00070536 other upstream 1231683 49801662 ~ 49818871 (+) True XLOC_036021
TCONS_00070526 other upstream 1670251 49378890 ~ 49380303 (+) True XLOC_036016
TCONS_00070520 other upstream 1945503 49092039 ~ 49105051 (+) False XLOC_036010
TCONS_00070506 other upstream 2317696 48732153 ~ 48732858 (+) True XLOC_036001
TCONS_00070562 other downstream 1035021 52161861 ~ 52162964 (+) True XLOC_036043
TCONS_00070576 other downstream 1404097 52530937 ~ 52543392 (+) False XLOC_036052
TCONS_00070587 other downstream 1896699 53023539 ~ 53023617 (+) True XLOC_036064
TCONS_00070588 other downstream 1896839 53023679 ~ 53023764 (+) True XLOC_036065
TCONS_00070598 other downstream 2118802 53245642 ~ 53255762 (+) True XLOC_036071

Expression Profile

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