RNA id: TU245418


Basic Information

Item Value
RNA id TU245418
length 1071
RNA type TUCP
GC content 0.43
exon number 2
gene id G181036
representative True

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 36682714 ~ 37034186 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

TAAATAAAACCATCTTACTTGTTGGTGAAACAGGAACAGGAAAATCTACTCTGATCAACGCTCTGGTCAACTACGCCATGGGTTGTGAAGTGGGAGGATGATGTCTGGTTTAAGATcgtagaggaggagaagaaaagtcAATCAGAAAGTCAGACATCAGATGTGATCGTGTACCAGATCTTTGGTTTTGAAGATAAAACTCTGCCCTACTCTCTGACCATCATCGATACTCCTGGATATGGAGACACCAGAGGGATCGAAAAAGATGTCATCATCAGTCAAAGATTATTTGACTTGTTCCGCTCAGTCAATGGAGTTCATGAGATTAATGCAGTGGGTCTGGTGCTGAAAGCGAGCGAGAATCGACTGAATGACCGACTGAGGTACATCTTTAATTCAGTGATCTCTCTGTTTGGAAAAGACATGGAGAAGAATATTGTCgctctcatcacacactcaaaTGGAAGAGCACCTAAAAATGCTGTGCAAGCTCTTGAGGCTGCGAAGATTAAATGTGCCAGAGATGAGAAAAATCAACCTGTTTGCTTCCTGTTTGATAACTGCCAACATGAAGACAGGACAGAGGATGCAGAAGCACTCAAACATGCAGATAAAATATCAATGAAAGGAATGAATCAGTTCACAAACTTTCTGGTAGAAACTGAACCTCAGAGATTGGAGACAACTGTAAATGTCCTGAACGAGCGAATCAGACTGACAGCCTGCATCCAAAACCTGCAAGACAGAATTGAGTTGATTGATCTAAAGCGAACAGAGATCCAACAGACTCAGGATGGTCTGAAGATGTATGAACGAGAGATGAAGAACAATGAGAAGTTCACTGTAGAAGTTGATGTGCCTTACAAAGATAAAGAACGTATCGATGGTGGGAAGTGGGGGTTGGTGTTCTATGAAGCAGCAACCTGCTGTACTGTCTGTAAGGAGAACTGTCACTATCCTGGATGCACAATGGCCCCGAAACCAGGACACTGTGAGGTCATGAAAGATGGCCGCTGCACGTCATGTTCCGGGAAGTGTCCTGCATCAGATCATGTGAAAGAAAACTGGAAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU245439 lncRNA downstream 7971 36653637 ~ 36674743 (-) True G181052
XR_005636665.1 lncRNA downstream 85619 36596695 ~ 36597095 (-) False LOC120545341
TU245434 lncRNA downstream 85622 36596620 ~ 36597092 (-) True LOC120545341
TU245402 lncRNA downstream 186234 36495973 ~ 36496480 (-) True G181029
TU245401 lncRNA downstream 187281 36495094 ~ 36495433 (-) True G181028
TU245465 lncRNA upstream 9842 36758460 ~ 36761102 (-) True G181077
TU245470 lncRNA upstream 12703 36761321 ~ 36798207 (-) True G181079
TU245474 lncRNA upstream 30516 36779134 ~ 36811082 (-) True G181083
TU245483 lncRNA upstream 37816 36786434 ~ 36839094 (-) True G181088
TU245419 lncRNA upstream 123892 36872510 ~ 37034186 (-) False G181036
XM_039779091.1 mRNA downstream 106542 36488931 ~ 36576172 (-) True myo5b
XM_039779484.1 mRNA downstream 207499 36459295 ~ 36475215 (-) True il7r
XM_039779489.1 mRNA downstream 329235 36344010 ~ 36353479 (-) False LOC120545285
XM_039779477.1 mRNA upstream 161835 36910453 ~ 36921735 (-) True LOC120545278
XM_039779464.1 mRNA upstream 213362 36961980 ~ 36968041 (-) True LOC120545269
XM_039779474.1 mRNA upstream 245792 36994410 ~ 37010368 (-) True LOC120545275
XM_039779475.1 mRNA upstream 273481 37022099 ~ 37034186 (-) True LOC120545276
XM_039779461.1 mRNA upstream 310811 37059429 ~ 37119170 (-) False LOC120545267
TU245425 other downstream 106535 36573642 ~ 36576179 (-) False myo5b
TU245351 other downstream 361949 36314916 ~ 36320765 (-) False G181004
TU245355 other downstream 364251 36314916 ~ 36318463 (-) False G181004
TU245228 other downstream 646814 35689754 ~ 36035900 (-) True LOC120545322
TU245415 other upstream 46953 36795571 ~ 37034186 (-) False G181036

Expression Profile