RNA id: TU249487


Basic Information

Item Value
RNA id TU249487
length 1105
RNA type TUCP
GC content 0.50
exon number 2
gene id G184231
representative True

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 14362341 ~ 14381187 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

CAGGGATTAAATCATGGCTGAAACGGATGTCTTAACTTACGTGGTTTCAGAGATGAGGGAAGTATGATTCTGCCGGTCTTGGAGCGAATCAGAGGAAGAGGGAACGGCTTTGGATGCTGTACAGGGGGTTTGCTGGAAGTGGGTGTTGAGGGTGCATGCGAGGCTCCACCCTGGGCTGCAGTGACCGGATGTGTAGCTGCGACTGAGCACTCCGTGTGGGAAGTGGGCATACTGACCTGGGCTGAGGCACCAGGGGTCTCTTGTTGGACCTCAAACTTTATCTGATGTTGACCGTCTGGTTGTGGGGGGGCAGGGGCCTTCGCCTGGGTTAGAGAGCACACTGATTGAGGCATGGGTGTCTGAGCCGTGGATTGGGCTGGAGGCCTTTGTAGGTTAGACCGAAGCAGAGACATCATCGTATTTAGGGCTTTTATGGGCGGGTTAGCCTGAGACGGAGCCGTGCAGAAGTCCGGCTGTAGCAGGGGTGTGGACTGGACCTTGGACTGGGAGGTAGTGGCTTGCAGAAGAGCTGCTCTGGACTGGAGTAGATTGGAAAAGAAAGGACTCCATTCCCGCTTCTTTTCTCTTATTTTCTGCCTCTCGCAGATCTCCGTCAGCTTGTGTTTAATCAGCTTGTCTGACTTCCCTAAAAAACACAGTAGGAAAGTCATTTTCCAGGTCTGGACTGCCAAATGTAGTAGATGGCAACTCAGACAACAATAGTGGTGATTCTGATATGTTGACGATGTTTGTCTCTGTGCATTTTAGGGAGTCTGATGCTGATGCTATATGTGAGGTAGGTGGACTTATTTCAACAGTCACTCCAAAAAAAGTAGGTGATGCTGCAGCAGGCTTGGCTGGGCTAGCTTCAGCAGGGGAAGAAAGAGACAAGCTACAATCATTACTTGCCATGGAGACAGCTTTTTCCTCAATCATTGTCTCACTGGGCAAATTAGGTTTCGTAGTGTTTGGATCAAGAGGAGTTGAAGAAAAGGCGATAGTAGGAGAAACTGAGGAGGGAATGTTAGTCAAGCTCCCCTCCTGTTTCTCCAATGCATTCTCCATTGATGTGAGTTTAGAGTCTGTGGCAGGCATCATCAATGGC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_005637034.1 lncRNA upstream 373685 13952385 ~ 13988656 (+) True LOC120547176
XR_005637035.1 lncRNA upstream 373685 13956925 ~ 13988656 (+) False LOC120547176
TU249355 lncRNA upstream 471425 13889301 ~ 13890916 (+) True G184128
TU249294 lncRNA upstream 888208 13468423 ~ 13474133 (+) False LOC120546706
TU249297 lncRNA upstream 901435 13458602 ~ 13460906 (+) False G184085
TU249501 lncRNA downstream 41140 14422327 ~ 14424853 (+) False LOC120546619
TU249514 lncRNA downstream 95437 14476624 ~ 14565127 (+) True G184249
TU249531 lncRNA downstream 177355 14558542 ~ 14606665 (+) True G184263
TU249632 lncRNA downstream 274447 14655634 ~ 14656247 (+) True G184339
TU249634 lncRNA downstream 279132 14660319 ~ 14660735 (+) True G184341
XM_039782364.1 mRNA upstream 26699 14329618 ~ 14335642 (+) False LOC120547018
XM_039782362.1 mRNA upstream 26699 14329618 ~ 14335642 (+) True LOC120547018
XM_039782365.1 mRNA upstream 26699 14329618 ~ 14335642 (+) False LOC120547018
XM_039782366.1 mRNA upstream 26699 14329618 ~ 14335642 (+) False LOC120547018
XM_039782361.1 mRNA upstream 26699 14331235 ~ 14335642 (+) False LOC120547018
XM_039781682.1 mRNA downstream 12253 14393440 ~ 14424864 (+) True LOC120546619
XM_039781684.1 mRNA downstream 13911 14395098 ~ 14424864 (+) False LOC120546619
XM_039781683.1 mRNA downstream 27744 14408931 ~ 14424864 (+) False LOC120546619
XM_039781681.1 mRNA downstream 27756 14408943 ~ 14424864 (+) False LOC120546619
XM_039781687.1 mRNA downstream 46377 14427564 ~ 14439516 (+) False LOC120546620
XR_005636930.1 other upstream 240827 14024484 ~ 14121514 (+) False LOC120546742
TU249175 other upstream 1114925 13206308 ~ 13247416 (+) False G183994
TU249176 other upstream 1212263 13145475 ~ 13150078 (+) True G183994
TU249092 other upstream 1353930 12990676 ~ 13008411 (+) True LOC120546167
XR_005637057.1 other upstream 3631559 10730505 ~ 10730782 (+) True LOC120547354
TU249525 other downstream 143949 14525136 ~ 14529370 (+) True G184258
XR_005636833.1 other downstream 908487 15289674 ~ 15293252 (+) False LOC120546207
TU249798 other downstream 920738 15301925 ~ 15318836 (+) True G184458
TU249859 other downstream 1279386 15660573 ~ 15663574 (+) True rhov
XR_005636865.1 other downstream 1313757 15694944 ~ 15716284 (+) False dpf3

Expression Profile